Parental gene: | NSFL1C, ENSPPYG00000010851 |
| Aliases: | None |
| Description: | NSFL1 cofactor p47 [Source:UniProtKB/Swiss-Prot;Acc:Q5RBG3] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 20:26918335..26943904(+) |
>ENSPPYG00000010851
ATGGCGGCGGAGCGACAGGAGGCGCTGAGGGAGTTCGTGGCGGTGACGGGCGCCGAGGAGGACCGGGCCCGCTTCTTTCT
CGAGTCGGCCGGCTGGGACTTGCAGATCGCGCTAGCGAGCTTTTATGAGGATGGAGGGGATGAAGACATTGTGACCATTT
CGCAGGCAACCCCCAGTTCAGTGTCCAGAGGCACAGCCCCCAGTGATAATAGGGTGACATCCTTCAGAGACCTCATTCAT
GACCAAGATGAAGATGAGGAAGAGGAGGAAGGCCAGAGGTTTTATGCTGGGGGCTCAGAGAGAAGTGGACAGCAGATTGT
TGGCCCTCCCAGGAAGAAAAGTCCCAACGAGCTGGTGGATGATCTCTTTAAAGGTGCCAAAGAGCATGGAGCTGTAGCTG
TGGAGCGAGTGACCAAGAGCCCTGGAGAGACCAGTAAACCGAGACCATTTGCAGGAGGTGGCTACCGCCTTGGGGCAGCA
CCAGAGGAAGAGTCTGCCTATGTGGCAGGAGAAAAGAGGCAGCATTCCAGCCAAGATGTTCATGTAGTATTGAAACTCTG
GAAGAGTGGATTCAGCCTGGATAATGGAGAACTCAGAAGCTACCAAGACCCATCCAATGCCCAGTTTCTGGAGTCTATCC
GCAGAGGGGAGGTGCCAGCAGAGCTTCGGAGGCTAGCTCACGGTGGACAGGTGAACTTGGATATGGAGGACCATCGGGAC
GAGGACTTTGTGAAGCCCAAAGGAGCCTTCAAAGCCTTCACTGGCGAGGGTCAGAAACTGGGCAGCACTGCCCCCCAGGT
GTTGAGTACCAGCTCTCCAGCCCAACAGGCAGAAAATGAAGCCAAAGCCAGCTCTTCCATCTTAATCGACGAATCAGAGC
CTACCACAAACATCCAAATTCGGCTTGCAGACGGCGGGAGGCTGGTGCAAAAATTTAACCACAGCCACAGGATCAGCGAC
ATCCGACTCTTCATCGTGGATGCCCGGCCAGCCATGGCTGCCACCAGCTTTATCCTCATGACTACTTTCCCGAACAAAGA
GCTGGCCGATGAGAGCCAGACCCTGAAGGAAGCCAACCTGCTCAATGCTGTCATCGTGCAGCGGTTAACATAA
ATGGCGGCGGAGCGACAGGAGGCGCTGAGGGAGTTCGTGGCGGTGACGGGCGCCGAGGAGGACCGGGCCCGCTTCTTTCT
CGAGTCGGCCGGCTGGGACTTGCAGATCGCGCTAGCGAGCTTTTATGAGGATGGAGGGGATGAAGACATTGTGACCATTT
CGCAGGCAACCCCCAGTTCAGTGTCCAGAGGCACAGCCCCCAGTGATAATAGGGTGACATCCTTCAGAGACCTCATTCAT
GACCAAGATGAAGATGAGGAAGAGGAGGAAGGCCAGAGGTTTTATGCTGGGGGCTCAGAGAGAAGTGGACAGCAGATTGT
TGGCCCTCCCAGGAAGAAAAGTCCCAACGAGCTGGTGGATGATCTCTTTAAAGGTGCCAAAGAGCATGGAGCTGTAGCTG
TGGAGCGAGTGACCAAGAGCCCTGGAGAGACCAGTAAACCGAGACCATTTGCAGGAGGTGGCTACCGCCTTGGGGCAGCA
CCAGAGGAAGAGTCTGCCTATGTGGCAGGAGAAAAGAGGCAGCATTCCAGCCAAGATGTTCATGTAGTATTGAAACTCTG
GAAGAGTGGATTCAGCCTGGATAATGGAGAACTCAGAAGCTACCAAGACCCATCCAATGCCCAGTTTCTGGAGTCTATCC
GCAGAGGGGAGGTGCCAGCAGAGCTTCGGAGGCTAGCTCACGGTGGACAGGTGAACTTGGATATGGAGGACCATCGGGAC
GAGGACTTTGTGAAGCCCAAAGGAGCCTTCAAAGCCTTCACTGGCGAGGGTCAGAAACTGGGCAGCACTGCCCCCCAGGT
GTTGAGTACCAGCTCTCCAGCCCAACAGGCAGAAAATGAAGCCAAAGCCAGCTCTTCCATCTTAATCGACGAATCAGAGC
CTACCACAAACATCCAAATTCGGCTTGCAGACGGCGGGAGGCTGGTGCAAAAATTTAACCACAGCCACAGGATCAGCGAC
ATCCGACTCTTCATCGTGGATGCCCGGCCAGCCATGGCTGCCACCAGCTTTATCCTCATGACTACTTTCCCGAACAAAGA
GCTGGCCGATGAGAGCCAGACCCTGAAGGAAGCCAACCTGCTCAATGCTGTCATCGTGCAGCGGTTAACATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 74 .48 RPM |
| SRP007412_cerebellum | 47 .91 RPM |
| SRP007412_heart | 24 .08 RPM |
| SRP007412_kidney | 39 .81 RPM |
| SRP007412_liver | 36 .20 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000088833 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000013539 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000003940 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000015994 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000027455 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009341 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000002630 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000018610 | within_species_paralog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000013164 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3324 | 88.48 | 58.65 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000010851 retrocopies