Parental gene: | RNASEH1, ENSGGOG00000034822 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 2a:3471717..3626255(-) |
>ENSGGOG00000034822
ATGAGCTGGCTTCTGTTCCTGGCCCACAAAGTCGCCTTGGTCGCCGTGCCCTGCCGCCGCGGCTCTCGCGGGTTCGGGAT
GTTCTATGCCGTGAGGAGGGGCCGCAAGACCGGGGTCTTTCTGACCTGGAATGAGTGCAGAGCACAGGTGGACCGGTTTC
CTGCTGCCAGATTTAAGAAGTTTGCCACAGAGGATGAGGCCTGGGCCTTTGTCAGGAAATCTGCAAGCCCGGAAGTTTCA
GAAGGGCGTGAAAATCAACATGGACAAGAATCGGATGCGAAAGCCATCAAGCGACTCCGTGAGCCACTGGATGGAGATGG
ACATGAAAGCGCAGAGCCGTATGCAAAGCACATGAAGCCGAGCGTGGAGCCGGCGCCTCCAGTTAGCAGAGACATGTTTT
CCTACATGGGAGACTTCGTCGTCGTCTACACTGATGGCTGCTGCTCCAGTAATGGGCGTAGAAGGCCGCGAGCAGGAATC
GGCGTTTACTGGGGGCCGGGCCATCCTTTAAATGTAGGCATTAGACTTCCTGGGCGGCAGACAAACCAAAGAGCGGAAAT
TCATGCAGCCTGCAAAGCCATTGAACAAGCAAAGACTCAAAACATCAATAAACTGGTTCTGTATACAGACAGTATGTTTA
CGATAAATGGTATAACTAACTGGGTTCAAGGTTGGAAGAAAAATGGGTGGAAGACAAGTGCAGGGAAAGAGGTGATCAAC
AAAGAGGACTTTGTGGCACTGGAGAGGCTGACCCAGGGGATGGACATTCAGTGGAAAATGGTTTTGGAACATACTTACAA
ACTGGATAATTCTTATATCCAGAGATCTAGAAAGGAGGGAGCTAAGCAG
ATGAGCTGGCTTCTGTTCCTGGCCCACAAAGTCGCCTTGGTCGCCGTGCCCTGCCGCCGCGGCTCTCGCGGGTTCGGGAT
GTTCTATGCCGTGAGGAGGGGCCGCAAGACCGGGGTCTTTCTGACCTGGAATGAGTGCAGAGCACAGGTGGACCGGTTTC
CTGCTGCCAGATTTAAGAAGTTTGCCACAGAGGATGAGGCCTGGGCCTTTGTCAGGAAATCTGCAAGCCCGGAAGTTTCA
GAAGGGCGTGAAAATCAACATGGACAAGAATCGGATGCGAAAGCCATCAAGCGACTCCGTGAGCCACTGGATGGAGATGG
ACATGAAAGCGCAGAGCCGTATGCAAAGCACATGAAGCCGAGCGTGGAGCCGGCGCCTCCAGTTAGCAGAGACATGTTTT
CCTACATGGGAGACTTCGTCGTCGTCTACACTGATGGCTGCTGCTCCAGTAATGGGCGTAGAAGGCCGCGAGCAGGAATC
GGCGTTTACTGGGGGCCGGGCCATCCTTTAAATGTAGGCATTAGACTTCCTGGGCGGCAGACAAACCAAAGAGCGGAAAT
TCATGCAGCCTGCAAAGCCATTGAACAAGCAAAGACTCAAAACATCAATAAACTGGTTCTGTATACAGACAGTATGTTTA
CGATAAATGGTATAACTAACTGGGTTCAAGGTTGGAAGAAAAATGGGTGGAAGACAAGTGCAGGGAAAGAGGTGATCAAC
AAAGAGGACTTTGTGGCACTGGAGAGGCTGACCCAGGGGATGGACATTCAGTGGAAAATGGTTTTGGAACATACTTACAA
ACTGGATAATTCTTATATCCAGAGATCTAGAAAGGAGGGAGCTAAGCAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 7 .62 RPM |
| SRP007412_cerebellum | 6 .62 RPM |
| SRP007412_heart | 3 .16 RPM |
| SRP007412_kidney | 4 .95 RPM |
| SRP007412_liver | 2 .82 RPM |
| SRP007412_testis | 6 .53 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000008547 | ortholog_one2one | 6 retrogenes | |
| Callithrix jacchus | ENSCJAG00000035450 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000012674 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000003610 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000014475 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000014491 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015400 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000025873 | possible_ortholog | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000002070 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000013051 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_336 | 69.18 | 98.23 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_2175 | 90.58 | 66.78 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000034822 retrocopies