Parental gene: | TUBA1B, ENSMEUG00000011167 |
| Aliases: | None |
| Description: | tubulin, alpha 1b [Source:HGNC Symbol;Acc:18809] |
| Organism: | Wallaby (Macropus eugenii) |
| Coordinates: | Scaffold107713:5208..9263(-) |
>ENSMEUG00000011167
ATGCGTGAATGTATCTCTATCCACGTTGGCCAAGCTGGTGTCCAGATTGGCAATGCCTGCTGGGAGTTGTACTGCCTGGA
GCATGGTATCCAGCCTGATGGTCAGATGCCAAGTGACAAGACCATTGGGGGAGGAGATGACTCCTTCAACACCTTCTTCA
GTGAAACAGGAGCTGGCAAACATGTCCCCAGAGCAGTGTTTGTAGATCTGGAACCAACTGTCATTGATGAAGTTCGCACT
GGAACCTACCGCCAGCTCTTCCATCCTGAGCAGCTGATCACTGGCAAGGAAGATGCTGCCAATAACTATGCCCGTGGGCA
CTACACTATTGGCAAGGAAATCATTGACTTGGTTCTAGACAGGATTCGGAAGCTGGCTGATCAGTGCACAGGTCTTCAGG
GCTTCTTGGTTTTCCACAGCTTTGGTGGTGGGACTGGCTCTGGTTTCACCTCTCTGCTGATGGAACGTCTGTCCGTTGAC
TATGGCAAGAAGTCCAAGCTGGAGTTCTCCATTTACCCAGCCCCTCAGGTTTCCACAGCTGTAGTGGAACCCTACAACTC
CATTCTGACCACTCACACCACCCTGGAGCACTCTGATTGTGCCTTCATGGTAGACAATGAGGCCATCTATGATATCTGTC
GCAGAAACCTTGACATTGAACGCCCAACCTATACTAATCTGAATCGCCTTATTAGTCAAATTGTGTCCTCCATCACTGCC
TCTCTCCGATTTGATGGTGCCCTGAATGTTGATCTGACAGAGTTCCAGACCAACCTGGTGCCCTATCCCCGTATCCATTT
CCCTCTGGCCACATATGCCCCAGTCATCTCTGCTGAGAAAGCCTACCATGAGCAACTTTCTGTAGCAGAGATCACCAATG
CTTGCTTTGAGCCTGCCAACCAGATGGTGAAATGTGACCCTCGCCATGGTAAATACATGGCTTGTTGCCTGCTCTACCGT
GGTGATGTGGTTCCCAAAGATGTCAATGCTGCTATTGCCACCATCAAGACAAAGCGTAGCATCCAGTTTGTGGATTGGTG
CCCAACTGGTTTCAAGGTTGGCATCAATTACCAGCCTCCCACTGTGGTTCCTGGTGGTGACCTGGCCAAGGTACAGCGGG
CTGTGTGCATGTTAAGCAACACCACAGCCATTGCTGAGGCCTGGGCTCGCCTGGACCACAAATTTGATCTGATGTATGCC
AAGCGTGCCTTTGTCCATTGGTATGTGGGGGAGGGCATGGAGGAAGGAGAGTTCTCTGAGGCACGGGAGGATATGGCTGC
CCTGGAGAAAGATTATGAGGAGGTTGGTGTGGATTCTGTTGAAGGAGAGGGTGAAGAGGAAGGAGAAGAGTACTAG
ATGCGTGAATGTATCTCTATCCACGTTGGCCAAGCTGGTGTCCAGATTGGCAATGCCTGCTGGGAGTTGTACTGCCTGGA
GCATGGTATCCAGCCTGATGGTCAGATGCCAAGTGACAAGACCATTGGGGGAGGAGATGACTCCTTCAACACCTTCTTCA
GTGAAACAGGAGCTGGCAAACATGTCCCCAGAGCAGTGTTTGTAGATCTGGAACCAACTGTCATTGATGAAGTTCGCACT
GGAACCTACCGCCAGCTCTTCCATCCTGAGCAGCTGATCACTGGCAAGGAAGATGCTGCCAATAACTATGCCCGTGGGCA
CTACACTATTGGCAAGGAAATCATTGACTTGGTTCTAGACAGGATTCGGAAGCTGGCTGATCAGTGCACAGGTCTTCAGG
GCTTCTTGGTTTTCCACAGCTTTGGTGGTGGGACTGGCTCTGGTTTCACCTCTCTGCTGATGGAACGTCTGTCCGTTGAC
TATGGCAAGAAGTCCAAGCTGGAGTTCTCCATTTACCCAGCCCCTCAGGTTTCCACAGCTGTAGTGGAACCCTACAACTC
CATTCTGACCACTCACACCACCCTGGAGCACTCTGATTGTGCCTTCATGGTAGACAATGAGGCCATCTATGATATCTGTC
GCAGAAACCTTGACATTGAACGCCCAACCTATACTAATCTGAATCGCCTTATTAGTCAAATTGTGTCCTCCATCACTGCC
TCTCTCCGATTTGATGGTGCCCTGAATGTTGATCTGACAGAGTTCCAGACCAACCTGGTGCCCTATCCCCGTATCCATTT
CCCTCTGGCCACATATGCCCCAGTCATCTCTGCTGAGAAAGCCTACCATGAGCAACTTTCTGTAGCAGAGATCACCAATG
CTTGCTTTGAGCCTGCCAACCAGATGGTGAAATGTGACCCTCGCCATGGTAAATACATGGCTTGTTGCCTGCTCTACCGT
GGTGATGTGGTTCCCAAAGATGTCAATGCTGCTATTGCCACCATCAAGACAAAGCGTAGCATCCAGTTTGTGGATTGGTG
CCCAACTGGTTTCAAGGTTGGCATCAATTACCAGCCTCCCACTGTGGTTCCTGGTGGTGACCTGGCCAAGGTACAGCGGG
CTGTGTGCATGTTAAGCAACACCACAGCCATTGCTGAGGCCTGGGCTCGCCTGGACCACAAATTTGATCTGATGTATGCC
AAGCGTGCCTTTGTCCATTGGTATGTGGGGGAGGGCATGGAGGAAGGAGAGTTCTCTGAGGCACGGGAGGATATGGCTGC
CCTGGAGAAAGATTATGAGGAGGTTGGTGTGGATTCTGTTGAAGGAGAGGGTGAAGAGGAAGGAGAAGAGTACTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000012244 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000008444 | possible_ortholog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000020874 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000028689 | possible_ortholog | 3 retrogenes | |
| Homo sapiens | ENSG00000123416 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000010779 | within_species_paralog | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000015206 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000023004 | ortholog_one2one | 6 retrogenes | |
| Otolemur garnettii | ENSOGAG00000009435 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000012950 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000000190 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_meug_157 | 73.78 | 71.62 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_meug_1121 | 82.00 | 54.99 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_meug_1616 | 81.28 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_meug_1964 | 73.15 | 56.54 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMEUG00000011167 retrocopies