Parental gene: | SMARCE1, ENSMICG00000009821 |
| Aliases: | None |
| Description: | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:HGNC Symbol;Acc:11109] |
| Organism: | Mouse Lemur (Microcebus murinus) |
| Coordinates: | GeneScaffold_3549:385989..403434(-) |
>ENSMICG00000009821
ATGTCAAAAAGACCATCTTATGCCCCACCTCCCACCCCAGCTCCTGCAACACAAATGCCCAGCACACCAGGGTTTGTGGG
ATACAATCCATACAGTCATCTCGCCTACAACAACTACAGGCTGGGAGGGAACCCGGGCACCAACAGCCGGGTCACGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAGGTACAGCAGAAGGGTC
TGGGACCAAGTAAAGGCTTCTAACCCTGACCTAAAGTTGTGGGAGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCT
CACTGATGAAGAGAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGAATACAATGAATCTATGAAGGCCTATC
ATAATTCCCCCGCTTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGAAGAAAGTCGACAGAGA
CAGTCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGATTATGATGATGGCTTTTC
AATGAAGCATACAGCCACTGCCCGTTTCCAGAGAAACCACCGCCTCATCAGTGAAATCCTTAGTGAGAGTGTGGTGCCAG
ACGTTCGGTCAGTTGTCACAACAGCCAGAATGCAGGTCCTCAAACGACAGGTCCAATCTTTAATGGTTCATCAGCGCAAA
CTAGAGGCTGAACTTCTTCAAATAGAGGAACGACATCAGGAAAAGAAGAGGAAATTCCTGGAAAGCACAGATTCATTTAA
CAATGAACTTAAAAGGCTAAAAGTATCTATAAAAATTGAGGCTGAGATTGCACAGAGTGAGACTCTGTCTCAAAAAAAGG
AAGTGGATATGGAGAAGGAGGCAGCAGAGCAAGCGGAGCGCAGTCAGAGCAGCATTGTTCCTGAGGAAGAGCAAGTGGCA
AATAAAGCTGAGGAAAAGAAAGATGACGAGAACATTCCAATGGAGACAGAGGAGACACACCTTGAAGAAACAACAGAAAG
CCAACAGAATGGTGAAGAAGGCACCTCAACTCCTGAGGACAAGGAGAGTGGGCAGGAGGGGGTTGACAGTATGGCAGAGG
AAGGAACCAGTGACAGCAACACCGGCTCAGAGAGCAACAGTGCCACAGTGGAGGAGCCACCAACAGATCCCATACCAGAA
GACGAGAAAAAGGAATAG
ATGTCAAAAAGACCATCTTATGCCCCACCTCCCACCCCAGCTCCTGCAACACAAATGCCCAGCACACCAGGGTTTGTGGG
ATACAATCCATACAGTCATCTCGCCTACAACAACTACAGGCTGGGAGGGAACCCGGGCACCAACAGCCGGGTCACGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAGGTACAGCAGAAGGGTC
TGGGACCAAGTAAAGGCTTCTAACCCTGACCTAAAGTTGTGGGAGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCT
CACTGATGAAGAGAAACAAGAATATTTAAACGAATACGAAGCAGAAAAGATAGAATACAATGAATCTATGAAGGCCTATC
ATAATTCCCCCGCTTACCTTGCTTACATAAATGCAAAAAGTCGTGCAGAAGCTGCTTTAGAGGAAGAAAGTCGACAGAGA
CAGTCTCGCATGGAGAAAGGAGAACCGTACATGAGCATTCAGCCTGCTGAAGATCCAGATGATTATGATGATGGCTTTTC
AATGAAGCATACAGCCACTGCCCGTTTCCAGAGAAACCACCGCCTCATCAGTGAAATCCTTAGTGAGAGTGTGGTGCCAG
ACGTTCGGTCAGTTGTCACAACAGCCAGAATGCAGGTCCTCAAACGACAGGTCCAATCTTTAATGGTTCATCAGCGCAAA
CTAGAGGCTGAACTTCTTCAAATAGAGGAACGACATCAGGAAAAGAAGAGGAAATTCCTGGAAAGCACAGATTCATTTAA
CAATGAACTTAAAAGGCTAAAAGTATCTATAAAAATTGAGGCTGAGATTGCACAGAGTGAGACTCTGTCTCAAAAAAAGG
AAGTGGATATGGAGAAGGAGGCAGCAGAGCAAGCGGAGCGCAGTCAGAGCAGCATTGTTCCTGAGGAAGAGCAAGTGGCA
AATAAAGCTGAGGAAAAGAAAGATGACGAGAACATTCCAATGGAGACAGAGGAGACACACCTTGAAGAAACAACAGAAAG
CCAACAGAATGGTGAAGAAGGCACCTCAACTCCTGAGGACAAGGAGAGTGGGCAGGAGGGGGTTGACAGTATGGCAGAGG
AAGGAACCAGTGACAGCAACACCGGCTCAGAGAGCAACAGTGCCACAGTGGAGGAGCCACCAACAGATCCCATACCAGAA
GACGAGAAAAAGGAATAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000013573 | ortholog_one2many | 4 retrogenes | |
| Homo sapiens | ENSG00000073584 | ortholog_one2one | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000011803 | ortholog_one2many | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000004609 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000004005 | ortholog_one2many | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000014660 | possible_ortholog | 4 retrogenes | |
| Mus musculus | ENSMUSG00000037935 | ortholog_one2one | 5 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000001957 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000008981 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000001652 | ortholog_one2one | 7 retrogenes | |
| Ochotona princeps | ENSOPRG00000000985 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000008456 | ortholog_one2many | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000022902 | ortholog_one2one | 5 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000011355 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000010676 | ortholog_one2one | 7 retrogenes | |
| Tupaia belangeri | ENSTBEG00000000770 | ortholog_one2one | 10 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmur_608 | 93.18 | 81.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmur_928 | 94.07 | 81.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmur_1408 | 64.94 | 54.32 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmur_1592 | 87.57 | 81.73 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMICG00000009821 retrocopies