Parental gene: | MMU.16776, ENSMMUG00000005157 |
| Aliases: | None |
| Description: | 28S ribosomal protein S25, mitochondrial [Source:RefSeq peptide;Acc:NP_001244599] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 11:84741051..84751790(-) |
>ENSMMUG00000005157
ATGCCCATGAAAGGCCGCTTCCCCATCCGCCGCACCCTGCAATATCTGAGCCAGGGAAACGTGGTGTTCAAGGAGTCCGT
GAAGGTCATGACAGTGAATTACAACACGCACGGGGAGCTGGGCGAGGGCGCCAGGAAATTTGTGTTTTTCAACATACCTC
AGATTCAATACAAAAACCCTTGGGTGCAGATCATGATGTTTAAGAACATGACGCCGTCACCCTTCCTGCGATTCTACTTA
GATTCTGGGGAGCAGGTCCTGGTGGATGTGGAGACCAAGAGCAATAAGGAGATCATGGAGCACATCAGAAAAATCTTGGG
GAAGAATGAGGAAACCCTCAGGGAAGAGGAGGAGAAGAAAAAGGAGCTCTCTCACCCAGCCAACTTCGGCCCTCGAAAGT
ACTGCCTGCGGGAGTGCATCTGTGAAGTGGAAGGGCAGGTGCCCTGCCCCAGCGTGGTGCCATTACCCAAGGAGATGAGG
GGGAAGTACAAAGCCATTCTGAAAGCCAGTGCCCAGGACTAA
ATGCCCATGAAAGGCCGCTTCCCCATCCGCCGCACCCTGCAATATCTGAGCCAGGGAAACGTGGTGTTCAAGGAGTCCGT
GAAGGTCATGACAGTGAATTACAACACGCACGGGGAGCTGGGCGAGGGCGCCAGGAAATTTGTGTTTTTCAACATACCTC
AGATTCAATACAAAAACCCTTGGGTGCAGATCATGATGTTTAAGAACATGACGCCGTCACCCTTCCTGCGATTCTACTTA
GATTCTGGGGAGCAGGTCCTGGTGGATGTGGAGACCAAGAGCAATAAGGAGATCATGGAGCACATCAGAAAAATCTTGGG
GAAGAATGAGGAAACCCTCAGGGAAGAGGAGGAGAAGAAAAAGGAGCTCTCTCACCCAGCCAACTTCGGCCCTCGAAAGT
ACTGCCTGCGGGAGTGCATCTGTGAAGTGGAAGGGCAGGTGCCCTGCCCCAGCGTGGTGCCATTACCCAAGGAGATGAGG
GGGAAGTACAAAGCCATTCTGAAAGCCAGTGCCCAGGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 25 .54 RPM |
| SRP007412_brain | 18 .04 RPM |
| SRP007412_cerebellum | 14 .85 RPM |
| SRP007412_heart | 23 .85 RPM |
| SRP007412_kidney | 23 .71 RPM |
| SRP007412_liver | 29 .57 RPM |
| SRP007412_testis | 45 .27 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000017160 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000131368 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000011005 | ortholog_one2one | 1 retrogene | |
| Latimeria chalumnae | ENSLACG00000009006 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005218 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013409 | ortholog_one2one | 1 retrogene | |
| Pelodiscus sinensis | ENSPSIG00000008882 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000014658 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000010912 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000027997 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_874 | 64.91 | 64.74 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_1946 | 65.92 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000005157 retrocopies