Parental gene:

MMU.2014, ENSMMUG00000010401

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:15:83870326..83928295(+)


>ENSMMUG00000010401
ATGTCGAAGCCGCCACCCAAACCAGTCAAACCAGGGCAAGTTAAAGTCTTCAGAGCCCTGTACACGTTTGAACCCAGAAC
TCCAGATGAATTATACTTTGAGGAAGGTGATATTATCTACATTACTGACATGAGTGACACCAACTGGTGGAAAGGCACCT
CCAAAGGCAGGACTGGACTAATTCCAAGCAACTATGTGGCTGAGCAGGCAGAATCTATTGACAATCCATTGCATGAAGCA
GCAAAAAGAGGCAACTTGAGCTGGTTGAGAGAGTGTTTGGACAACAGAGTGGGTGTTAATGGCTTAGACAAAGCTGGAAG
CACTGCCTTGTACTGGGCTTGCCACGGGGGTCACAAAGATATAGTAGAAATGCTATTTACTCAACCAAATATTGAACTGA
ACCAGCAGAACAAGTTGGGAGACACAGCTTTGCATGCTGCTGCCTGGAAGGGTTATGCAGATATTGTCCAGTTGCTTCTG
GCAAAAGGTGCTAGAACAGACTTAAGAAACAATGAGAAGAAGCTGGCCTTCGACATGGCTACCAATGCTGCCTGTGCATC
TCTCCTGAAAAAGAAACAGGGAACAGATGCAGTTCGAACATTAAGCAATGCCGAGGACTATCTCGATGATGAAGACTCAG
ATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 16 .82 RPM
SRP007412_brain 19 .38 RPM
SRP007412_cerebellum 14 .21 RPM
SRP007412_heart 11 .31 RPM
SRP007412_kidney 27 .70 RPM
SRP007412_liver 17 .93 RPM
SRP007412_testis 9 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012808 ortholog_one2one 1 retrogene
retro_cjac_3249,
Cavia porcellus ENSCPOG00000007226 ortholog_one2one 1 retrogene
retro_cpor_1049,
Dipodomys ordii ENSDORG00000002933 ortholog_one2one 1 retrogene
retro_dord_698,
Erinaceus europaeus ENSEEUG00000008320 ortholog_one2one 2 retrogenes
retro_eeur_545, retro_eeur_683,
Felis catus ENSFCAG00000022374 ortholog_one2one 1 retrogene
retro_fcat_1869,
Homo sapiens ENSG00000134996 ortholog_one2one 1 retrogene
retro_hsap_1058,
Gorilla gorilla ENSGGOG00000011920 ortholog_one2one 1 retrogene
retro_ggor_836,
Nomascus leucogenys ENSNLEG00000001854 ortholog_one2one 1 retrogene
retro_nleu_2502,
Otolemur garnettii ENSOGAG00000002603 ortholog_one2one 1 retrogene
retro_ogar_2962,
Pongo abelii ENSPPYG00000019300 ortholog_one2one 1 retrogene
retro_pabe_883,
Pan troglodytes ENSPTRG00000021031 ortholog_one2one 1 retrogene
retro_ptro_720,
Rattus norvegicus ENSRNOG00000012156 ortholog_one2one 2 retrogenes
retro_rnor_936, retro_rnor_937,
Sus scrofa ENSSSCG00000005273 ortholog_one2one 1 retrogene
retro_sscr_979,
Tursiops truncatus ENSTTRG00000003081 ortholog_one2one 1 retrogene
retro_ttru_492,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_836 79.23 95.33
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Download FASTA sequences of all ENSMMUG00000010401 retrocopies