Parental gene:

OSTF1, ENSPTRG00000021031

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:9:73676235..73735027(+)


>ENSPTRG00000021031
ATGTCGAAGCCGCCACCCAAACCAGTCAAACCAGGGCAAGTTAAAGTCTTCAGAGCCCTGTATACGTTTGAACCCAGAAC
TCCAGATGAATTATACTTTGAGGAAGGCGATATTATCTACATTACTGACATGAGCGATACCAATTGGTGGAAAGGCACCT
CCAAAGGCAGGACTGGACTAATTCCAAGCAACTATGTGGCTGAGCAGGCAGAATCCATTGACAATCCATTGCATGAAGCA
GCAAAAAGAGGCAACTTGAGCTGGTTGAGAGAGTGTTTGGACAACAGAGTGGGTGTTAATGGCTTAGACAAAGCTGGAAG
CACTGCCTTATACTGGGCTTGCCACGGGGGCCACAAAGATATAGTAGAAATGCTATTTACTCAACCAAATATTGAACTGA
ACCAGCAGAACAAGTTGGGAGATACAGCTTTGCATGCTGCTGCCTGGAAGGGTTATGCAGATATCGTCCAGTTGCTTCTG
GCAAAAGGTGCTAGAACAGACTTAAGAAACATTGAGAAGAAGCTGGCCTTCGACATGGCTACCAATGCTGCCTGTGCATC
TCTCCTGAAAAAGAAACAGGGAACAGATGCAGTTCGAACATTAAGCAATGCCGAGGACTATCTCGATGATGAAGACTCAG
ATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 27 .58 RPM
SRP007412_cerebellum 21 .47 RPM
SRP007412_heart 13 .49 RPM
SRP007412_kidney 23 .25 RPM
SRP007412_liver 30 .54 RPM
SRP007412_testis 14 .33 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012808 ortholog_one2one 1 retrogene
retro_cjac_3249,
Cavia porcellus ENSCPOG00000007226 ortholog_one2one 1 retrogene
retro_cpor_1049,
Dipodomys ordii ENSDORG00000002933 ortholog_one2one 1 retrogene
retro_dord_698,
Erinaceus europaeus ENSEEUG00000008320 ortholog_one2one 2 retrogenes
retro_eeur_545, retro_eeur_683,
Felis catus ENSFCAG00000022374 ortholog_one2one 1 retrogene
retro_fcat_1869,
Homo sapiens ENSG00000134996 ortholog_one2one 1 retrogene
retro_hsap_1058,
Gorilla gorilla ENSGGOG00000011920 ortholog_one2one 1 retrogene
retro_ggor_836,
Macaca mulatta ENSMMUG00000010401 ortholog_one2one 1 retrogene
retro_mmul_836,
Nomascus leucogenys ENSNLEG00000001854 ortholog_one2one 1 retrogene
retro_nleu_2502,
Otolemur garnettii ENSOGAG00000002603 ortholog_one2one 1 retrogene
retro_ogar_2962,
Pongo abelii ENSPPYG00000019300 ortholog_one2one 1 retrogene
retro_pabe_883,
Rattus norvegicus ENSRNOG00000012156 ortholog_one2one 2 retrogenes
retro_rnor_936, retro_rnor_937,
Sus scrofa ENSSSCG00000005273 ortholog_one2one 1 retrogene
retro_sscr_979,
Tursiops truncatus ENSTTRG00000003081 ortholog_one2one 1 retrogene
retro_ttru_492,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_720 83.82 95.33
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Download FASTA sequences of all ENSPTRG00000021031 retrocopies