Parental gene: | THOC4, ENSMMUG00000012884 |
| Aliases: | THOC4, ALYREF |
| Description: | Aly/REF export factor [Source:RefSeq peptide;Acc:NP_001247942] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 16:77316953..77320712(-) |
>ENSMMUG00000012884
ATGCCCGATTCCGCGCCCGCCATGGCCGACAAAATGGACATGTCTCTGGACGACATCATTAAACTGAACCGGAGCCAACG
AGGCGGCCGCGGCGGGGGCCGGGGCCGCGGCCGGGCCGGCTCCCAGGGCGGTCGCGGCGGTGGGGCGCAGGCCGCCGCGC
GAGTGAGTCGAGGCGGCGGGCCCATCCGGAACCGGCCGGCCATCGCCCGCGGCGCGGCCGGCGGAGGCGGCAGGAACCGA
CCGGCGCCCTACAGCAGGCCAAAACAACTTCCCGACAAGTGGCAGCACGATCTTTTCGACAGTGGCTTCGGGGGTGGTGC
CGGCGTGGAGACGGGTGGGAAACTGCTGGTGTCCAATCTGGATTTTGGAGTTTCAGACGCCGATATTCAGGAACTCTTTG
CTGAATTTGGAACGCTGAAGAAGGCGGCTGTGCACTATGATCGCTCTGGCCGCAGCTTAGGAACAGCAGACGTGCACTTT
GAGCGGAAGGCAGATGCCCTGAAGGCCATGAAGCAGTACAACGGCGTCCCTCTGGATGGCCGCCCCATGAACATTCAGCT
TGTCACATCACAGATTGATACACAGCGGAGACCTGCACAGAGCGTAAACAGAGGTGGCATGACTAGAAACCGTGGCGCTG
GAGGTTTTGGTGGCGGTGGAGGCACTCGGAGGGGCACCCGTGGAGGCGCCCGTGGAAGAGGCAGAGGTGCCGGCAGAAAT
TCAAAGCAGCAGCTTTCGGCAGAGGAGCTGGATGCTCAGCTGGACGCCTATAATGCGAGAATGGACACCAGTTAA
ATGCCCGATTCCGCGCCCGCCATGGCCGACAAAATGGACATGTCTCTGGACGACATCATTAAACTGAACCGGAGCCAACG
AGGCGGCCGCGGCGGGGGCCGGGGCCGCGGCCGGGCCGGCTCCCAGGGCGGTCGCGGCGGTGGGGCGCAGGCCGCCGCGC
GAGTGAGTCGAGGCGGCGGGCCCATCCGGAACCGGCCGGCCATCGCCCGCGGCGCGGCCGGCGGAGGCGGCAGGAACCGA
CCGGCGCCCTACAGCAGGCCAAAACAACTTCCCGACAAGTGGCAGCACGATCTTTTCGACAGTGGCTTCGGGGGTGGTGC
CGGCGTGGAGACGGGTGGGAAACTGCTGGTGTCCAATCTGGATTTTGGAGTTTCAGACGCCGATATTCAGGAACTCTTTG
CTGAATTTGGAACGCTGAAGAAGGCGGCTGTGCACTATGATCGCTCTGGCCGCAGCTTAGGAACAGCAGACGTGCACTTT
GAGCGGAAGGCAGATGCCCTGAAGGCCATGAAGCAGTACAACGGCGTCCCTCTGGATGGCCGCCCCATGAACATTCAGCT
TGTCACATCACAGATTGATACACAGCGGAGACCTGCACAGAGCGTAAACAGAGGTGGCATGACTAGAAACCGTGGCGCTG
GAGGTTTTGGTGGCGGTGGAGGCACTCGGAGGGGCACCCGTGGAGGCGCCCGTGGAAGAGGCAGAGGTGCCGGCAGAAAT
TCAAAGCAGCAGCTTTCGGCAGAGGAGCTGGATGCTCAGCTGGACGCCTATAATGCGAGAATGGACACCAGTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 18 .48 RPM |
| SRP007412_brain | 10 .20 RPM |
| SRP007412_cerebellum | 9 .17 RPM |
| SRP007412_heart | 13 .84 RPM |
| SRP007412_kidney | 10 .45 RPM |
| SRP007412_liver | 9 .70 RPM |
| SRP007412_testis | 85 .15 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000005877 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000013935 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000025134 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000010459 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000005834 | ortholog_one2many | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_1679 | 78.57 | 63.26 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000012884 retrocopies