Parental gene:

RAD23B, ENSMMUG00000014944

Aliases:None
Description:UV excision repair protein RAD23 homolog B [Source:RefSeq peptide;Acc:NP_001248717]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:15:28868242..28915241(-)


>ENSMMUG00000014944
ATGCAGGTCACCCTGAAGACCCTCCAGCAGCAGACCTTCAAAATAGACATCGACCCCGAGGAGACGGTGAAAGCACTGAA
AGAGAAGATTGAATCTGAAAAGGGGAAAGATGCCTTTCCGGTAGCAGGTCAAAAATTAATTTATGCAGGCAAAATCCTCA
ATGATGATACTGCTCTCAAAGAATACAAAATTGATGAGAAAAACTTTGTGGTGGTTATGGTGACCAAACCCAAAGCAGTG
TCCACACCAGCACCAGCTACAACTCAGCAGTCAGCTCCTGCGAGCACTACAGCCATTACTTCCTCTACCGCAACAACTGT
GGCTCAGGCTCCAACCCCTGTCCCTGCTTTGGCTCCCACTTCCACACCTGCATCCATCACTCCAGCATCAGCGACAGCAT
CTTCTGAACCTGCACCTGCTAGTGCAACTAAACAAGAGAAACCTGCAGAAAAGCCAGCAGAGACACCAGTGGCTACTAGC
CCAACAGCAACTGACAGTACATCGGGAGATTCTTCTCGATCAAACCTTTTTGAAGATGCAACGAGTGCACTTGTGACGGG
TCAGTCTTACGAGAATATGGTAACTGAGATCATGTCAATGGGCTATGAACGAGAGCAAGTAATTGCAGCCCTGAGAGCCA
GTTTCAACAACCCTGACAGAGCAGTGGAGTATCTTTTAATGGGAATCCCTGGAGATAGAGAAAGTCAGGCTGTGGTTGAC
CCCCCTCAAGCAGCTAGTACTGGGGCTCCTCAGTCTTCAGCAGTGGCTGCAGCTGCAGCAACTACGACAGCAACGACAAC
AACAACAAGTTCTGGAGGACATCCCCTTGAATTTTTACGGAATCAACCTCAGTTTCAACAGATGAGACAAATTATTCAAC
AGAATCCTTCCCTGCTTCCAGCATTACTACAGCAGATAGGTCGAGAGAATCCTCAGTTACTTCAGCAAATTAGCCAACAC
CAGGAGCATTTTATTCAGATGTTAAATGAACCAGTTCAAGAAGCTGGTGGTCAAGGAGGAGGAGGTGGAGGTGGCAGTGG
AGGAATTGCAGAAGCTGGAAGTGGTCATATGAACTACATTCAAGTAACGCCTCAGGAAAAAGAAGCTATAGAAAGGTTAA
AGGCATTAGGATTTCCTGAAGGACTTGTGATACAAGCATATTTTGCTTGTGAGAAGAATGAGAATTTGGCTGCCAATTTT
CTTCTACAGCAGAACTTTGATGAAGATTGA

Library Parental gene expression (RPM)
SRP007412_brain 126 .62 RPM
SRP007412_brain_prefrontal_cortex 106 .78 RPM
SRP007412_cerebellum 119 .66 RPM
SRP007412_heart 88 .09 RPM
SRP007412_kidney 83 .68 RPM
SRP007412_liver 74 .93 RPM
SRP007412_testis 78 .52 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000001926 ortholog_one2one 1 retrogene
retro_btau_877,
Callithrix jacchus ENSCJAG00000016908 ortholog_one2many 2 retrogenes
retro_cjac_3865, retro_cjac_4184,
Equus caballus ENSECAG00000021928 ortholog_one2one 1 retrogene
retro_ecab_361,
Homo sapiens ENSG00000119318 ortholog_one2one 2 retrogenes
retro_hsap_2611, retro_hsap_3754,
Gorilla gorilla ENSGGOG00000002511 ortholog_one2one 1 retrogene
retro_ggor_1829,
Nomascus leucogenys ENSNLEG00000017319 ortholog_one2one 1 retrogene
retro_nleu_1590,
Oryctolagus cuniculus ENSOCUG00000007316 possible_ortholog 1 retrogene
retro_ocun_1429,
Otolemur garnettii ENSOGAG00000014216 ortholog_one2one 1 retrogene
retro_ogar_3040,
Pongo abelii ENSPPYG00000019477 ortholog_one2one 2 retrogenes
retro_pabe_2344, retro_pabe_3162,
Pan troglodytes ENSPTRG00000021229 ortholog_one2one 1 retrogene
retro_ptro_1760,
Sarcophilus harrisii ENSSHAG00000011925 ortholog_one2many 1 retrogene
retro_shar_248,
Sus scrofa ENSSSCG00000005436 ortholog_one2one 1 retrogene
retro_sscr_770,
Tursiops truncatus ENSTTRG00000007597 ortholog_one2one 1 retrogene
retro_ttru_1401,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1476 84.19 56.48
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_mmul_1725 65.24 55.50
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMMUG00000014944 retrocopies