Parental gene: | Chtop, ENSMUSG00000001017 |
| Aliases: | Chtop, 2500003M10Rik, C81330, Fop, Srag |
| Description: | chromatin target of PRMT1 [Source:MGI Symbol;Acc:MGI:1913761] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 3:90498955..90509498(-) |
>ENSMUSG00000001017
ATGCTGAAGAACAAACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGCCAGAAA
CAGAAGACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAGCAGAAGAGCTTAAAGCAGC
GCCTGGGTAAGAGTAATATCCAGGCACGGTTAGGCCGACCCATAGGTGCCCTGGCCAGGGGAGCAATTGGAGGAAGAGGC
CTACCCATAATCCAGAGAGGCTTGCCCCGAGGAGGACTACGTGGGGGACGTGCTACCAGAACCCTGCTTAGGGGTGGGAT
GTCGCTCCGAGGTCAAAACCTGCTCCGAGGTGGACGAGCCGTAGCTCCCCGAATGGGCTTAAGAAGAGGTGGTGTTCGAG
GTCGTGGAGGTCCTGGGAGAGGGGGCCTAGGGCGTGGAGCTATGGGTCGTGGCGGAATCGGTGGTAGAGGTCGGGGTATG
ATAGGTCGGGGAAGAGGGGGCTTTGGAGGCAGAGGCCGAGGTCGTGGCCGAGGGAGAGGTGCCCTCACTCGCCCTGTATT
GACCAAGGAGCAGCTGGACAACCAATTGGATGCATACATGTCGAAAACTAAAGGACACCTGGATGCTGAATTGGATGCCT
ACATGGCACAGACAGATCCTGAAACCAATGATTGA
ATGCTGAAGAACAAACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGCCAGAAA
CAGAAGACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAGCAGAAGAGCTTAAAGCAGC
GCCTGGGTAAGAGTAATATCCAGGCACGGTTAGGCCGACCCATAGGTGCCCTGGCCAGGGGAGCAATTGGAGGAAGAGGC
CTACCCATAATCCAGAGAGGCTTGCCCCGAGGAGGACTACGTGGGGGACGTGCTACCAGAACCCTGCTTAGGGGTGGGAT
GTCGCTCCGAGGTCAAAACCTGCTCCGAGGTGGACGAGCCGTAGCTCCCCGAATGGGCTTAAGAAGAGGTGGTGTTCGAG
GTCGTGGAGGTCCTGGGAGAGGGGGCCTAGGGCGTGGAGCTATGGGTCGTGGCGGAATCGGTGGTAGAGGTCGGGGTATG
ATAGGTCGGGGAAGAGGGGGCTTTGGAGGCAGAGGCCGAGGTCGTGGCCGAGGGAGAGGTGCCCTCACTCGCCCTGTATT
GACCAAGGAGCAGCTGGACAACCAATTGGATGCATACATGTCGAAAACTAAAGGACACCTGGATGCTGAATTGGATGCCT
ACATGGCACAGACAGATCCTGAAACCAATGATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 93 .59 RPM |
| SRP007412_cerebellum | 79 .46 RPM |
| SRP007412_heart | 64 .75 RPM |
| SRP007412_kidney | 55 .73 RPM |
| SRP007412_liver | 41 .21 RPM |
| SRP007412_testis | 62 .85 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000013518 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000010383 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000002740 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000016098 | ortholog_one2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000012760 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000000660 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000012442 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000010259 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1693 | 77.59 | 77.23 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1852 | 95.58 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000001017 retrocopies