RetrogeneDB ID: | retro_mluc_201 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429788:1508169..1508910(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000003910 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000016098 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 93.12 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIRASMQQQQQLASARNRRLAQQMENRPSVQAALK |
MAAQSAPKVVLKSTTKMSLNERFTNMLKN.QPMPVNIRASMQQQQQLASARNRRLAQQMENRPSVQAALK | |
Retrocopy | MAAQSAPKVVLKSTTKMSLNERFTNMLKNQQPMPVNIRASMQQQQQLASARNRRLAQQMENRPSVQAALK |
Parental | LKQKSLKQRLGKSNIQARLGRPIGTLARGAIGGRGLPLIQRGLPRGGLRGGRATRTLLRGGMSLRGQNLL |
LKQ.SLKQRLGKSNIQARLGRPIG.LARGAIGGRGLP.IQR.LPRGG.RGGRAT.TLLRGGMSLRGQNLL | |
Retrocopy | LKQ-SLKQRLGKSNIQARLGRPIGALARGAIGGRGLPIIQRALPRGGPRGGRATGTLLRGGMSLRGQNLL |
Parental | RGGRAVAPRMGLRRGGVRGRGGPGRGGLGRGAMGRGGIGGRGRGMIGRGRGGFGGRGRGRG--ALTRPVL |
RGGRAVAP.MGLRRGGVRGRGGPGRG.LG..AMGRG.IGGRGRGMIGRGRGGFGGRGRGRG..A..RP.L | |
Retrocopy | RGGRAVAPQMGLRRGGVRGRGGPGRGCLGLEAMGRGRIGGRGRGMIGRGRGGFGGRGRGRGRGAFARPAL |
Parental | TKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPETND |
TKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPETND | |
Retrocopy | TKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPETND |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000013518 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000010383 | 3 retrocopies | |
Dasypus novemcinctus | ENSDNOG00000004834 | 1 retrocopy | |
Equus caballus | ENSECAG00000020889 | 1 retrocopy | |
Felis catus | ENSFCAG00000002740 | 1 retrocopy | |
Loxodonta africana | ENSLAFG00000002658 | 3 retrocopies | |
Myotis lucifugus | ENSMLUG00000016098 | 2 retrocopies |
retro_mluc_201 , retro_mluc_247,
|
Mus musculus | ENSMUSG00000001017 | 2 retrocopies | |
Rattus norvegicus | ENSRNOG00000012760 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000000660 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000012442 | 1 retrocopy | |
Vicugna pacos | ENSVPAG00000010259 | 1 retrocopy |