Parental gene:

Ccdc12, ENSMUSG00000019659

Aliases:Ccdc12, 2700094L05Rik, C76605
Description:coiled-coil domain containing 12 [Source:MGI Symbol;Acc:MGI:1919904]
Organism:Mouse (Mus musculus)
Coordinates:9:110656502..110711590(+)


>ENSMUSG00000019659
ATGGCGGCTGCTCCTGCCGGTGTGGGCCGCCTAGAGGAAGAGGCGCTGCGGCGGAAAGAACGGCTGAAGGCCCTCCGGGA
GAAAACCGGGCGCAAGGACAGGGAAGATGGGGAGCCACAGACCAAGCAGCTCAGAGAAGAGGGAGAGGAAGTTGGGAAGC
ACAGGGGACTCAGGCTCCGGAACTATGTCCCAGAGGATGAAGACCTGAAGAGGAGGCGGGTCCCCCAGGCCAAACCAGTG
GCAGTGGAGGAGAAGGTGAAGGAGCAGCTGGAGGCAGCCAAGCCAGAGCCTGTCATTGAGGAAGTGGACCTGGCCAACCT
GGCACCCCGGAAACCTGATTGGGATCTCAAGAGAGATGTGGCCAAGAAGCTAGAGAAGCTAGAAAAGCGGACCCAGAGAG
CCATCGCGGAGCTGATCCGTGAGCGGCTAAAAGGCCAGGAGGACAGCCTGGCCTCTGCAGTGGATGCCACCACCGGACAA
GAGGCTTGTGACTCTGACTGA

Library Parental gene expression (RPM)
SRP007412_brain 8 .85 RPM
SRP007412_cerebellum 9 .42 RPM
SRP007412_heart 17 .81 RPM
SRP007412_kidney 13 .44 RPM
SRP007412_liver 6 .39 RPM
SRP007412_testis 14 .77 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002280 ortholog_one2one 3 retrogenes
retro_cjac_1212, retro_cjac_2317, retro_cjac_3225,
Dipodomys ordii ENSDORG00000016567 ortholog_one2one 1 retrogene
retro_dord_303,
Echinops telfairi ENSETEG00000000030 ortholog_one2one 2 retrogenes
retro_etel_1445, retro_etel_2038,
Homo sapiens ENSG00000160799 ortholog_one2one 1 retrogene
retro_hsap_2257,
Macaca mulatta ENSMMUG00000019810 ortholog_one2one 1 retrogene
retro_mmul_1025,
Nomascus leucogenys ENSNLEG00000006219 ortholog_one2one 1 retrogene
retro_nleu_1282,
Ochotona princeps ENSOPRG00000005086 ortholog_one2one 1 retrogene
retro_opri_746,
Pongo abelii ENSPPYG00000013924 ortholog_one2one 2 retrogenes
retro_pabe_1957, retro_pabe_2033,
Pan troglodytes ENSPTRG00000014862 ortholog_one2one 1 retrogene
retro_ptro_1597,
Sarcophilus harrisii ENSSHAG00000003265 ortholog_one2one 1 retrogene
retro_shar_251,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1275 92.00 90.36
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Download FASTA sequences of all ENSMUSG00000019659 retrocopies