Parental gene:

CCDC12, ENSPPYG00000013924

Aliases:None
Description:coiled-coil domain containing 12 [Source:HGNC Symbol;Acc:28332]
Organism:Orangutan (Pongo abelii)
Coordinates:3:99610490..99671902(+)


>ENSPPYG00000013924
ATGCCAGGCCTTGGCAGAGCAACCCATCCACTACAGGGAAGAAGGCTCAGACAGACCCAGGCCTGCGCGATGCAAGACGG
GAGAAAAGGAGGGGCGTACGCGGGCAAGATGGAGGCGACTACGGCTGGTGTGGGCCGGCTAGAGGAAGAGGCGTTGCGGC
GAAAGGAACGGCTGAAGGCCCTACGGGAGAAAACCGGGCGCAAGGACAAGGAAGATGGGGAGCCAAAGACCAAGCATCTC
AGAGAAGAGGAGGAAGAAGGCGAGAAGCACAGGGAACTTAGGCTGCGGAACTATGTCCCGGAGGATGAGGACCTGAAGAA
GAGGAGGGTGCCCCAGGCCAAACCGGTTGCAGTGGAGGAGAAGGTGAAGGAGCAGCTGGAGGCCGCCAAGCCCGAGCCCG
TCATCGAGGAGGTGGACCTGGCCAACCTCGCTCCTCGGAAGCCTGACTGGGACCTCAAGAGAGATGTGGCCAAGAAGCTG
GAGAAACTAAAAAAACGGACTCAGAGGGCCATTGCTGAGCTAATCCGTGAAAGGCTGAAAGGCCAGGAAGATAACCTAGC
CTCTGCAGTGGATGCTGCCACCGAACAAAAGGCCTGTGACTCCGACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 21 .01 RPM
SRP007412_cerebellum 16 .90 RPM
SRP007412_heart 11 .83 RPM
SRP007412_kidney 24 .56 RPM
SRP007412_liver 12 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002280 ortholog_one2one 3 retrogenes
retro_cjac_1212, retro_cjac_2317, retro_cjac_3225,
Dipodomys ordii ENSDORG00000016567 ortholog_one2one 1 retrogene
retro_dord_303,
Echinops telfairi ENSETEG00000000030 ortholog_one2one 2 retrogenes
retro_etel_1445, retro_etel_2038,
Homo sapiens ENSG00000160799 ortholog_one2one 1 retrogene
retro_hsap_2257,
Macaca mulatta ENSMMUG00000019810 ortholog_one2one 1 retrogene
retro_mmul_1025,
Mus musculus ENSMUSG00000019659 ortholog_one2one 1 retrogene
retro_mmus_1275,
Nomascus leucogenys ENSNLEG00000006219 ortholog_one2one 1 retrogene
retro_nleu_1282,
Ochotona princeps ENSOPRG00000005086 ortholog_one2one 1 retrogene
retro_opri_746,
Pan troglodytes ENSPTRG00000014862 ortholog_one2one 1 retrogene
retro_ptro_1597,
Sarcophilus harrisii ENSSHAG00000003265 ortholog_one2one 1 retrogene
retro_shar_251,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1957 70.47 72.77
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_pabe_2033 71.62 72.28
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000013924 retrocopies