Parental gene:

Nop16, ENSMUSG00000025869

Aliases:Nop16, AA409471, D13Wsu177e
Description:NOP16 nucleolar protein [Source:MGI Symbol;Acc:MGI:107862]
Organism:Mouse (Mus musculus)
Coordinates:13:54584184..54590090(-)


>ENSMUSG00000025869
ATGCCCAAGGCTAAGGGAAAGACTCGGAGGCAGAAGTTCGGTTACAACGTCAACCGAAAGCGTCTGAACCGGAATGCTCG
TCGGAAGGCAGCGCCACGGATTGAGTGTTCCCACATACGACATGCCTGGGACCACACCAAATCCGTGCGGCAGAACCTGG
CGGAGATGGGGTTGGCCATGGACCCCAACAAGGCGGTTCCCCTCCGTAAGAAGAAGGTAAAGGCCATGGAGGTAGACACG
GAGGAGCGACCCCGGGATCTTGTACGGAAGCCCTATGTGGTAAATGACCTGGAGGCAGAAGCCAGCCTCCCAGAGAAGAA
AGGAAATACCTTGTCTCGGGACCTCATCGACTATGTGCGGTACATGGTAGAGAATCACGGGGAGGACTACAAGGCCATGG
CCCGGGATGAGAAGAATTACTACCAAGACACCCCAAAACAGATCCGGAATAAGATCAATGTCTATAAGCGCTTTTACCCA
ACGGAGTGGCAAGCCTTCATCGATTCTCTGCAGAGTAAGAAGATGGAGGTAGACTGA

Library Parental gene expression (RPM)
SRP007412_brain 12 .52 RPM
SRP007412_cerebellum 10 .42 RPM
SRP007412_heart 9 .99 RPM
SRP007412_kidney 19 .10 RPM
SRP007412_liver 18 .30 RPM
SRP007412_testis 10 .20 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012315 ortholog_one2many 1 retrogene
retro_cjac_2208,
Cavia porcellus ENSCPOG00000026072 ortholog_one2one 1 retrogene
retro_cpor_129,
Echinops telfairi ENSETEG00000010391 ortholog_one2many 1 retrogene
retro_etel_1329,
Myotis lucifugus ENSMLUG00000003504 ortholog_one2one 1 retrogene
retro_mluc_2425,
Mustela putorius furo ENSMPUG00000012552 possible_ortholog 1 retrogene
retro_mputfur_381,
Rattus norvegicus ENSRNOG00000017284 ortholog_one2many 1 retrogene
retro_rnor_2739,
Sus scrofa ENSSSCG00000029577 ortholog_one2one 1 retrogene
retro_sscr_510,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_3033 79.59 81.46
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2. retro_mmus_3258 80.77 71.91
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Download FASTA sequences of all ENSMUSG00000025869 retrocopies