Parental gene:

Tmem30a, ENSMUSG00000032328

Aliases:Tmem30a, 2010200I23Rik, AW540225, Cdc50a, D9Wsu20e
Description:transmembrane protein 30A [Source:MGI Symbol;Acc:MGI:106402]
Organism:Mouse (Mus musculus)
Coordinates:9:79768942..79793507(-)


>ENSMUSG00000032328
ATGGCGATGAACTATAGCGCGAAGGATGAGGTGGACGGCGGGCCCGCGGGTCCTCCCGGGGGCGCCGCCAAGACCCGGAG
GCCGGATAACACGGCCTTCAAACAGCAACGGCTACCCGCCTGGCAGCCCATCCTCACGGCCGGCACGGTGCTGCCCACCT
TCTTCATCATCGGCCTCATCTTCATCCCCATCGGCATCGGCATCTTCGTCACCTCCAACAACATCCGTGAGATCGAGATT
GATTACACTGGAACAGAACCTTCCAGCCCCTGCAATAAATGTTTATCTCCGAATGTGACATCTTGTGCTTGTACCATTAA
CTTCACACTGAAACAGTCATTTGAGGGCAATGTGTTTATGTATTATGGACTGTCTAATTTCTATCAAAATCATCGTCGCT
ACGTGAAATCTCGAGATGATAGCCAGTTAAATGGAGACCCTAGTGCTTTGCTTAATCCAAGTAAGGAATGTGAACCTTAT
AGAAGAAATGAAGACAGACCAATTGCGCCATGTGGCGCTATTGCCAACAGCATGTTTAATGATACGTTAGAATTGTATCT
GGTTGCCAATGAATCTGATCCCAAGCCTATTCCAATTCCTTTGAAGAAAAAAGGTATTGCTTGGTGGACAGATAAAAATG
TGAAATTCAGAAATCCACCTGGAAAAGAGAGCCTCGAAGAAAAGTTTAAAGATACAATAAAGCCAGTAAACTGGCATAAG
GCAGTATATGAGCTAGACCCTGAAGATGAAAGTAATAATGGATTCATAAATGAAGACTTTATAGTTTGGATGCGTACTGC
AGCATTACCTACTTTTCGTAAGTTGTATCGTCTCATAGAGCGGAGAGATGATTTACACCCAACATTACCAGCTGGACAGT
ACTTTTTGAACATCACATACAATTACCCTGTGCATTCCTTTGATGGACGGAAACGGATGATCTTGAGCACTATTTCATGG
ATGGGAGGAAAGAATCCATTTTTGGGAATTGCTTACATCACTATTGGATCCATCTCTTTCCTTCTGGGAGTTGTACTGCT
AGTAATTAATCATAAATATAGAAACAGTAGTAACACTGCTGACATCACCATTTAA

Library Parental gene expression (RPM)
SRP007412_brain 303 .44 RPM
SRP007412_cerebellum 193 .92 RPM
SRP007412_heart 68 .74 RPM
SRP007412_kidney 129 .84 RPM
SRP007412_liver 138 .56 RPM
SRP007412_testis 70 .30 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005100 ortholog_one2one 1 retrogene
retro_btau_72,
Canis familiaris ENSCAFG00000002708 ortholog_one2one 1 retrogene
retro_cfam_26,
Callithrix jacchus ENSCJAG00000010325 ortholog_one2one 1 retrogene
retro_cjac_801,
Cavia porcellus ENSCPOG00000020712 ortholog_one2many 1 retrogene
retro_cpor_23,
Homo sapiens ENSG00000112697 ortholog_one2one 1 retrogene
retro_hsap_12,
Myotis lucifugus ENSMLUG00000011923 ortholog_one2one 1 retrogene
retro_mluc_1871,
Monodelphis domestica ENSMODG00000018502 ortholog_one2one 1 retrogene
retro_mdom_287,
Nomascus leucogenys ENSNLEG00000004962 ortholog_one2one 1 retrogene
retro_nleu_69,
Otolemur garnettii ENSOGAG00000015718 ortholog_one2one 1 retrogene
retro_ogar_22,
Pongo abelii ENSPPYG00000016782 ortholog_one2one 1 retrogene
retro_pabe_204,
Pelodiscus sinensis ENSPSIG00000007174 ortholog_one2one 1 retrogene
retro_psin_61,
Rattus norvegicus ENSRNOG00000010895 ortholog_one2one 1 retrogene
retro_rnor_399,
Ictidomys tridecemlineatus ENSSTOG00000002543 ortholog_one2one 1 retrogene
retro_itri_50,
Tarsius syrichta ENSTSYG00000008211 ortholog_one2one 1 retrogene
retro_tsyr_928,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_108 57.14 70.60
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Download FASTA sequences of all ENSMUSG00000032328 retrocopies