Parental gene:

Chchd3, ENSMUSG00000053768

Aliases:Chchd3, 0610041L09Rik, 1700039J09Rik, AW558177
Description:coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:MGI Symbol;Acc:MGI:1913325]
Organism:Mouse (Mus musculus)
Coordinates:6:32790975..33060260(-)


>ENSMUSG00000053768
ATGGGCGGGACCGCTAGCACCCGCCGGGTCACCTTCGAGGCGGACGAGAACGAGAACATCACCGTGGTGAAGGGCATCCG
GCTTTCAGAAAATGTGATCGACCGGATGAAGGAGTCCTCTCCATCTGGCTCTAAGTCTCAGCGATATTCCAGCGTTTATG
GTGCTTCAGTTTCTGATGAAGATTTGAAAAGAAGAGTAGCTGAGGAGCTGGCATTGGAGCAAGCCAAAAAGGAGTCAGAA
CACCAGAGACGCCTTAAGCAAGCAAGGGACCTAGAAAGAGAAAGGGCTGCAGCCAATGAGCAGCTGACCAGAGCTGTCCT
TCGGGAAAGAATATCCAGTGAAGAGGAGCGCATGAAGGCGAAGCATCTGGCTCGGCAGCTGGAAGAGAAAGACCGAGTGA
TGCGGAAGCAGGATGCATTCTACAAAGAGCAGCTGGCCAGACTGGAGGAGAGGAGCTCAGAGTTCTACAAAGTCACCACC
GAGGAGTATCAGAAAGCTGCTGAAGAGGTGGAAGCCAAGTTCAAGCGGTATGAATATCATCCAGTCTGTGCAGATCTGCA
GACCAAAATCCTCCAGTGTTACCGTCAGAACACCCAGCAGACTCTCAGCTGCTCTGCTCTGGCTAGCCAATACATGCACT
GTGTCAACCATGCCAAACAGAGCATGCTGGAGAAGGGAGGCTAA

Library Parental gene expression (RPM)
SRP007412_brain 34 .32 RPM
SRP007412_cerebellum 40 .34 RPM
SRP007412_heart 231 .73 RPM
SRP007412_kidney 143 .14 RPM
SRP007412_liver 70 .29 RPM
SRP007412_testis 103 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000001312 ortholog_one2one 1 retrogene
retro_cfam_374,
Dasypus novemcinctus ENSDNOG00000004942 ortholog_one2one 1 retrogene
retro_dnov_2559,
Homo sapiens ENSG00000106554 ortholog_one2one 3 retrogenes
retro_hsap_358, retro_hsap_3759, retro_hsap_542,
Macaca mulatta ENSMMUG00000001671 ortholog_one2many 1 retrogene
retro_mmul_14,
Nomascus leucogenys ENSNLEG00000012967 ortholog_one2one 3 retrogenes
retro_nleu_168, retro_nleu_716, retro_nleu_904,
Oryctolagus cuniculus ENSOCUG00000014032 ortholog_one2one 1 retrogene
retro_ocun_801,
Pongo abelii ENSPPYG00000025827 ortholog_one2one 5 retrogenes
retro_pabe_2492, retro_pabe_3161, retro_pabe_345, retro_pabe_411, retro_pabe_501,
Pan troglodytes ENSPTRG00000019711 ortholog_one2one 4 retrogenes
retro_ptro_2550, retro_ptro_282, retro_ptro_407, retro_ptro_701,
Rattus norvegicus ENSRNOG00000013211 ortholog_one2one 1 retrogene
retro_rnor_2874,
Sorex araneus ENSSARG00000012111 ortholog_one2one 1 retrogene
retro_sara_592,
Ictidomys tridecemlineatus ENSSTOG00000022282 ortholog_one2one 1 retrogene
retro_itri_1301,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_3452 57.35 58.59
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Download FASTA sequences of all ENSMUSG00000053768 retrocopies