Parental gene: | Dppa5a, ENSMUSG00000060461 |
| Aliases: | Dppa5a, AA536857, Dppa5, Esg1, ecat2 |
| Description: | developmental pluripotency associated 5A [Source:MGI Symbol;Acc:MGI:101800] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 9:78367051..78368177(-) |
>ENSMUSG00000060461
ATGATGGTGACCCTCGTGACCCGTAAAGATATCCCCCCGTGGGTGAAAGTTCCTGAAGACCTGAAAGATCCAGAAGTATT
CCAGGTCCAGTCGCTGGTGCTGAAATATCTGTTTGGCCCACAGGGATCTCGAATGTCTCACATCGAGCAGGTGAGCCAGG
CCATGTTTGAGCTGAAGAACCTGGAATCTCCCGAAGAACTTATCGAGGTCTTCATTTACGGCTCTCAAAACAACAAGATT
CGGGCTAAATGGATGCTTCAGTCCATGGCTGAGAGGTACCACCTGCGCCAGCAAAAAGGAGTGCTGAAGCTGGAGGAATC
CATGAAGACCCTGGAGCTAGGCCAGTGTATCGAGTGA
ATGATGGTGACCCTCGTGACCCGTAAAGATATCCCCCCGTGGGTGAAAGTTCCTGAAGACCTGAAAGATCCAGAAGTATT
CCAGGTCCAGTCGCTGGTGCTGAAATATCTGTTTGGCCCACAGGGATCTCGAATGTCTCACATCGAGCAGGTGAGCCAGG
CCATGTTTGAGCTGAAGAACCTGGAATCTCCCGAAGAACTTATCGAGGTCTTCATTTACGGCTCTCAAAACAACAAGATT
CGGGCTAAATGGATGCTTCAGTCCATGGCTGAGAGGTACCACCTGCGCCAGCAAAAAGGAGTGCTGAAGCTGGAGGAATC
CATGAAGACCCTGGAGCTAGGCCAGTGTATCGAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .02 RPM |
| SRP007412_cerebellum | 0 .04 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .02 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .09 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000002647 | ortholog_one2many | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000012338 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000009945 | ortholog_many2many | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000011544 | ortholog_many2many | 4 retrogenes | |
| Dipodomys ordii | ENSDORG00000000378 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000203909 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000012001 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000004463 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000000417 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000016771 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000029547 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000000199 | ortholog_many2many | 3 retrogenes | |
| Sus scrofa | ENSSSCG00000004283 | ortholog_one2many | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000005326 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_58 | 84.48 | 98.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_127 | 85.98 | 90.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_1280 | 74.29 | 88.98 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_1537 | 92.38 | 88.98 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmus_1666 | 89.08 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmus_2557 | 94.07 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mmus_3415 | 94.12 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000060461 retrocopies