Parental gene:

PRPF38A, ENSNLEG00000017999

Aliases:None
Description:None
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397296.1:1006430..1019987(-)


>ENSNLEG00000017999
CGAATCTATGAGTCCAAGTATTGGAAAGAGGAGTGCTTTGGCCTTACGGCTGAACTTGTAGTCGATAAAGCCATGGAGTT
AAGGTTTGTGGGTGGCGTCTATGGTGGCAACATAAAACCAACACCCTTTCTGTGTTTAACCTTGAAGATGCTTCAGATTC
AACCCGAGAAGGATATCATTGTAGAGTTTATCAAAAATGAAGATTTCAAGTATGTCCGCATGCTGGGGGCACTTTACATG
AGGCTGACAGGCACAGCAATTGATTGCTACAAGTACTTGGAGCCTTTGTACAATGACTATCGAAAAATCAAGAGCCAGAA
CCGAAATGGGGAGTTTGAATTGATGCATGTTGATGAGTTTATTGATGAACTATTGCACAGTGAGAGAGTCTGTGATATCA
TTCTGCCCCGACTACAGAAACGCTATGTATTAGAGGAGGCTGAGCAACTGGAGCCTCGAGTTAGTGCTCTGGAAGAGGAC
ATGGATGATGTGGAGTCCAGTGAAGAGGAAGAAGAGGAGGATGAGAAGTTGGAAAGAGTGCCATCACCTGATCACCGCCG
GAGAAGCTACCGAGACTTGGACAAGCCCCGTCGCTCTCCCACACTGCGCTACAGAAGGAGTAGGAGCCGGTCTCCCAGAA
GGCGGAGTCGATCTCCCAAAAGGAGAAGCCCCTCCCCTCGCCGAGAAAGGCATCGGAGCAAGAGTCCAAGACGTCACCGC
AGCAGGTCCCGAGATCGGCGGCACAGATCCCGTTCCAAGTCCCCAGGTCATCACCGTAGTCACAGACACAGGAGCCACTC
AAAGTCTCCCGAAAGGTCTAAGAAGAGCCACAAGAAGAGCCGGAGAGGGAATGAGTAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000021594 ortholog_one2one 1 retrogene
Dasypus novemcinctus ENSDNOG00000013904 ortholog_one2one 1 retrogene
Homo sapiens ENSG00000134748 ortholog_one2one 2 retrogenes
Gorilla gorilla ENSGGOG00000003940 ortholog_one2one 4 retrogenes
Loxodonta africana ENSLAFG00000025862 ortholog_one2one 1 retrogene
Myotis lucifugus ENSMLUG00000001053 ortholog_one2one 8 retrogenes
Monodelphis domestica ENSMODG00000000644 ortholog_one2many 1 retrogene
Mus musculus ENSMUSG00000063800 ortholog_one2one 2 retrogenes
Oryctolagus cuniculus ENSOCUG00000000963 ortholog_one2one 1 retrogene
Otolemur garnettii ENSOGAG00000005423 ortholog_one2one 1 retrogene
Petromyzon marinus ENSPMAG00000005561 ortholog_one2one 1 retrogene
Pongo abelii ENSPPYG00000001348 ortholog_one2one 2 retrogenes
Pan troglodytes ENSPTRG00000000739 ortholog_one2one 2 retrogenes
Pteropus vampyrus ENSPVAG00000009803 ortholog_one2one 1 retrogene
Sus scrofa ENSSSCG00000003858 ortholog_one2one 1 retrogene
Ictidomys tridecemlineatus ENSSTOG00000015610 ortholog_one2many 1 retrogene
Taeniopygia guttata ENSTGUG00000008995 ortholog_one2one 3 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_715 76.39 99.65
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2. retro_nleu_719 87.06 100.00
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Download FASTA sequences of all ENSNLEG00000017999 retrocopies