Parental gene:

MAT2A, ENSOANG00000003060

Aliases:None
Description:methionine adenosyltransferase II, alpha [Source:HGNC Symbol;Acc:6904]
Organism:Platypus (Ornithorhynchus anatinus)
Coordinates:Contig3262:35127..42352(+)


>ENSOANG00000003060
ATGATCCTTCTTGCTGGGGAAATCACATCCAGAGCTGCTGTCGACTACCAGAAAGTGGTCCGAGAAACCATCAAACACGT
GGGCTATGATGATTCTTCCAAAGGGTTTGACTATAAAACCTGTAATGTGCTCGTGGCCTTGGAGCAGCAGTCCCCCGATA
TTGCTCAGGGAGTTCATCTGGACAGAAATGAAGAGGATATTGGTGCGGGTGACCAGGGCTTGATGTTTGGCTATGCCACA
GATGAGACAGAAGAGTGCATGCCGTTGACCATTGTCCTCGCGCACAAACTCAACGCTAAGCTGGCCGAGTTGCGGCGCAA
TGGCACCCTGCCTTGGCTTCGTCCAGATTCCAAAACTCAAGTGACGGTACAGTACATGCAGGACCGCGGGGCCGTCCTTC
CCATCAGAGTCCACACGATCGTCATCTCCGTCCAACATGACGAAGACGTCTGCTTGGATGAGATGAGGGATGCCCTGAAG
GAGAAGGTGATCAAAGCCGTCGTGCCGGCCAAGTACCTGGATGAGGACACAATCTATCACCTGCAGCCTAGTGGCAGGTT
TGTCATCGGTGGGCCTCAGGGTGACGCTGGCTTGACGGGACGCAAGATCATCGTGGACACGTATGGTGGCTGGGGTGCTC
ACGGCGGAGGAGCTTTCTCCGGAAAGGATTATACCAAAGTGGATCGTTCGGCTGCCTACGCCGCCCGTTGGGTCGCAAAG
TCCCTTGTGAAAGGAGGTCTGTGCAGGCGGGTGCTTGTTCAGGTATCTTATGCCATCGGAGTGGCTCATCCATTGTCCAT
CTCCATCTTCCATTATGGCACCTCTCAGAAGAGCGAGAGGGAGCTGCTGGAGATTGTGAAGAAGAACTTTGACCTCCGAC
CCGGGGTCATTGTCAGGGATCTGGATCTGAAGAAACCAATTTATCAGAGGACTGCAGCCTATGGCCACTTTGGTAGGGAC
AGCTTCCCATGGGAAGTGCCCAAAAAGCTAAAGTATTGA

Library Parental gene expression (RPM)
SRP007412_brain 251 .78 RPM
SRP007412_cerebellum 247 .74 RPM
SRP007412_heart 81 .38 RPM
SRP007412_kidney 366 .27 RPM
SRP007412_liver 31 .91 RPM
SRP007412_testis 1419 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013959 ortholog_one2many 1 retrogene
retro_chof_30,
Echinops telfairi ENSETEG00000007634 ortholog_one2many 2 retrogenes
retro_etel_1308, retro_etel_1532,
Echinops telfairi ENSETEG00000015680 ortholog_one2many 4 retrogenes
retro_etel_1669, retro_etel_1813, retro_etel_597, retro_etel_977,
Otolemur garnettii ENSOGAG00000026925 ortholog_one2one 1 retrogene
retro_ogar_1580,
Rattus norvegicus ENSRNOG00000013520 ortholog_one2one 2 retrogenes
retro_rnor_2032, retro_rnor_955,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_oana_84 56.15 55.12
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Download FASTA sequences of all ENSOANG00000003060 retrocopies