Parental gene: | Mat2a, ENSRNOG00000013520 |
| Aliases: | Mat2a, Sams2 |
| Description: | S-adenosylmethionine synthase isoform type-2 [Source:RefSeq peptide;Acc:NP_599178] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 4:165067989..165073559(-) |
>ENSRNOG00000013520
ATGAACGGGCAGCTCAACGGCTTCCATGAGGCGTTCATCGAGGAGGGGACATTCCTTTTCACTTCAGAGTCTGTAGGGGA
AGGTCATCCAGATAAGATTTGTGACCAAATCAGTGATGCTGTCCTTGATGCACACCTTCAGCAGGACCCTGATGCTAAAG
TGGCTTGTGAAACTGTTGCTAAAACTGGAATGATCCTTCTTGCTGGGGAAATTACATCTAGAGCTGCCATTGATTACCAG
AAAGTGGTTCGTGAAGCCATAAAGCACATTGGCTATGATGATTCTTCCAAAGGGTTTGACTACAAGACTTGTAATGTGTT
GGTTGCCTTGGAACAACAGTCACCAGATATCGCCCAAGGTGTTCATCTTGACCGGAATGAGGAAGACATTGGTGCAGGAG
ATCAGGGTTTGATGTTTGGTTATGCCACTGATGAAACTGAAGAGTGTATGCCTTTAACTATTGTCTTAGCACACAAGCTA
AATGCTAAACTGGCTGAGCTACGCCGCAATGGCACATTGCCTTGGTTACGCCCAGATTCTAAAACTCAAGTGACTGTGCA
GTATATGCAAGATCGAGGTGCTGTGATTCCCATCAGAGTCCACACAATTGTTATATCTGTTCAGCATGATGAAGAAGTTT
GTCTTGATGAAATGAGGGATGCTCTGAAGGAGAAAGTGATCAAAGCTGTTGTACCTGCAAAGTACCTTGATGAGGATACA
ATTTACCACCTACAGCCAAGTGGCAGATTCGTTATTGGTGGGCCTCAGGGTGATGCTGGTTTGACTGGCCGAAAAATCAT
TGTGGATACTTATGGCGGTTGGGGAGCTCATGGAGGAGGGGCCTTTTCAGGAAAGGATTATACCAAAGTGGACCGTTCAG
CTGCTTATGCTGCTCGTTGGGTGGCAAAATCCCTTGTTAAAGGAGGTCTGTGCAGGAGGGTTCTTGTTCAGGTCTCTTAT
GCTATTGGAGTTTCTCATCCATTGTCGATCTCCATTTTCCATTATGGTACTTCTCAGAAGAGTGAGAGAGAGCTATTAGA
AATTGTGAAGAATAATTTTGATCTTCGCCCTGGGGTCATTGTCAGGGATCTGGATCTGAAGAAGCCAATTTATCAGAGGA
CTGCAGCCTATGGCCACTTTGGTAGGGACAGCTTCCCCTGGGAAGTGCCCAAAAAGCTTAAATATTGA
ATGAACGGGCAGCTCAACGGCTTCCATGAGGCGTTCATCGAGGAGGGGACATTCCTTTTCACTTCAGAGTCTGTAGGGGA
AGGTCATCCAGATAAGATTTGTGACCAAATCAGTGATGCTGTCCTTGATGCACACCTTCAGCAGGACCCTGATGCTAAAG
TGGCTTGTGAAACTGTTGCTAAAACTGGAATGATCCTTCTTGCTGGGGAAATTACATCTAGAGCTGCCATTGATTACCAG
AAAGTGGTTCGTGAAGCCATAAAGCACATTGGCTATGATGATTCTTCCAAAGGGTTTGACTACAAGACTTGTAATGTGTT
GGTTGCCTTGGAACAACAGTCACCAGATATCGCCCAAGGTGTTCATCTTGACCGGAATGAGGAAGACATTGGTGCAGGAG
ATCAGGGTTTGATGTTTGGTTATGCCACTGATGAAACTGAAGAGTGTATGCCTTTAACTATTGTCTTAGCACACAAGCTA
AATGCTAAACTGGCTGAGCTACGCCGCAATGGCACATTGCCTTGGTTACGCCCAGATTCTAAAACTCAAGTGACTGTGCA
GTATATGCAAGATCGAGGTGCTGTGATTCCCATCAGAGTCCACACAATTGTTATATCTGTTCAGCATGATGAAGAAGTTT
GTCTTGATGAAATGAGGGATGCTCTGAAGGAGAAAGTGATCAAAGCTGTTGTACCTGCAAAGTACCTTGATGAGGATACA
ATTTACCACCTACAGCCAAGTGGCAGATTCGTTATTGGTGGGCCTCAGGGTGATGCTGGTTTGACTGGCCGAAAAATCAT
TGTGGATACTTATGGCGGTTGGGGAGCTCATGGAGGAGGGGCCTTTTCAGGAAAGGATTATACCAAAGTGGACCGTTCAG
CTGCTTATGCTGCTCGTTGGGTGGCAAAATCCCTTGTTAAAGGAGGTCTGTGCAGGAGGGTTCTTGTTCAGGTCTCTTAT
GCTATTGGAGTTTCTCATCCATTGTCGATCTCCATTTTCCATTATGGTACTTCTCAGAAGAGTGAGAGAGAGCTATTAGA
AATTGTGAAGAATAATTTTGATCTTCGCCCTGGGGTCATTGTCAGGGATCTGGATCTGAAGAAGCCAATTTATCAGAGGA
CTGCAGCCTATGGCCACTTTGGTAGGGACAGCTTCCCCTGGGAAGTGCCCAAAAAGCTTAAATATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 14 .25 RPM |
| SRP017611_kidney | 280 .87 RPM |
| SRP017611_brain | 68 .16 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000013959 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000007634 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000015680 | ortholog_one2many | 4 retrogenes | |
| Ornithorhynchus anatinus | ENSOANG00000003060 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000026925 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_955 | 96.97 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2032 | 97.73 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000013520 retrocopies