Parental gene:

TSPAN6, ENSOGAG00000004869

Aliases:None
Description:tetraspanin 6 [Source:HGNC Symbol;Acc:11858]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873644.1:5729903..5734727(-)


>ENSOGAG00000004869
TTCTCAGTTGTAGAAACTCGTAAGTTTTCGGCAGTTTCCGGGGAGACTCGGACACTCCGCGTCTCGCTCGCTCTGTGGCG
CTCGCCCGGTGCGGTGGTGCAGGGTCTCGGGCTAGTCATGGCGTCCCCGTCTCGGAGACTGCAGACTAAACCAGTTATTA
CTTGTTTCAAGAGCGTCCTCTTGATCTACACTTTCATCTTTTGGATCACTGGTGTGGTCCTCCTTGCCGTTGGCATTTGG
GGCAAGGTGAGCCTAGAGAATTATTTTTCCCTTTTAAACGAGAAGGCCACCAATGTCCCCTTCGTGCTGATTGGCACTGG
CACTGTCATTATTCTTTTGGGCACCTTCGGTTGTTTTGCTACCTGCCGAGCTTCTGCATGGATGCTAAAACTGTATGCAA
TGTTTCTGACTCTCATTTTTTTGGTCGAACTGGTCGCTGCCATAGTAGGATTTGTATTCAGACATGAGATTAAGAACAGC
TTTAAGAATAATTATGTGAAGGCTTTGAAACAGTATAACTCTACGGGAGATTATAAAAGCGATGCAGTAGACAAGATACA
AAATACGTTGCATTGTTGTGGTGTCACCGACTATAGAGATTGGACAGATACTAATTATTACTCAGAAAAAGGATTTCCCA
AAAGTTGTTGTAAACATGAAGATTGCTCTCCACAGAGAGACGCTGATAAAGTGAACAATGAGGGTTGTTTTTTAAAGGTG
ATGACCATTATAGAGTCAAAAATGGGAGTTGTTGCAGGAATTTCCTTTGGAGTTGCTTGCTTTCAGCTTATTGGAATCTT
TCTAGCCTACTGCCTCTCTCGTGCCATAACAAATAACCAGTATGAGATAGTGTAA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000017521 ortholog_one2one 3 retrogenes
retro_cfam_1600, retro_cfam_1609, retro_cfam_878,
Callithrix jacchus ENSCJAG00000004288 ortholog_one2one 1 retrogene
retro_cjac_2306,
Echinops telfairi ENSETEG00000012276 ortholog_one2many 1 retrogene
retro_etel_1987,
Loxodonta africana ENSLAFG00000027296 ortholog_one2one 1 retrogene
retro_lafr_994,
Microcebus murinus ENSMICG00000011370 ortholog_one2one 1 retrogene
retro_mmur_447,
Nomascus leucogenys ENSNLEG00000007505 ortholog_one2one 1 retrogene
retro_nleu_1186,
Otolemur garnettii ENSOGAG00000008547 within_species_paralog 2 retrogenes
retro_ogar_1615, retro_ogar_3124,
Otolemur garnettii ENSOGAG00000016713 other_paralog 2 retrogenes
retro_ogar_2407, retro_ogar_469,
Sarcophilus harrisii ENSSHAG00000000274 ortholog_one2one 1 retrogene
retro_shar_515,
Sus scrofa ENSSSCG00000012481 ortholog_one2many 1 retrogene
retro_sscr_84,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_2827 72.25 79.58
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Download FASTA sequences of all ENSOGAG00000004869 retrocopies