Parental gene: | RAB6C, ENSSTOG00000023497 |
| Aliases: | None |
| Description: | RAB6C, member RAS oncogene family [Source:HGNC Symbol;Acc:16525] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393308.1:2842038..2906978(-) |
>ENSSTOG00000023497
ATGTCCGCGGGCGGAGACTTCGGGAATCCGCTGAGGAAATTCAAGCTGGTGTTCCTAGGAGAGCAGAGCGTTGGAAAAAC
ATCCTTGATCACCAGATTCATGTATGACAGTTTTGACAACACTTATCAGGCAACAATTGGCATTGACTTTTTATCAAAAA
CCATGTACTTGGAGGATCGAACAATCAGGCTGCAGCTGTGGGATACTGCGGGTCAGGAACGTTTCCGTAGCCTCATTCCC
AGTTACATCCGTGATTCTGCTGCAGCTGTAGTAGTTTACGATATCACAAATGTTAACTCATTCCAGCAAACTACAAAATG
GATTGATGATGTCAGAACAGAAAGAGGAAGTGATGTTATCATCATGCTAGTAGGAAATAAAACAGATCTTGCTGACAAGA
GGCAAGTTTCAATTGAGGAAGGCGAGAGGAAAGCCAAAGAACTGAATGTTATGTTCATTGAAACCAGTGCAAAAGCAGGA
TACAATGTAAAGCAGCTCTTCCGACGTGTAGCAGCGGCTTTACCTGGAATGGAAAGCACACAGGACAGAAGCAGAGAAGA
CATGATTGACATTAAACTGGAAAAGCCTCAGGAGCAACCAGTTAGTGAAGGAGGCTGTTCCTGCTAA
ATGTCCGCGGGCGGAGACTTCGGGAATCCGCTGAGGAAATTCAAGCTGGTGTTCCTAGGAGAGCAGAGCGTTGGAAAAAC
ATCCTTGATCACCAGATTCATGTATGACAGTTTTGACAACACTTATCAGGCAACAATTGGCATTGACTTTTTATCAAAAA
CCATGTACTTGGAGGATCGAACAATCAGGCTGCAGCTGTGGGATACTGCGGGTCAGGAACGTTTCCGTAGCCTCATTCCC
AGTTACATCCGTGATTCTGCTGCAGCTGTAGTAGTTTACGATATCACAAATGTTAACTCATTCCAGCAAACTACAAAATG
GATTGATGATGTCAGAACAGAAAGAGGAAGTGATGTTATCATCATGCTAGTAGGAAATAAAACAGATCTTGCTGACAAGA
GGCAAGTTTCAATTGAGGAAGGCGAGAGGAAAGCCAAAGAACTGAATGTTATGTTCATTGAAACCAGTGCAAAAGCAGGA
TACAATGTAAAGCAGCTCTTCCGACGTGTAGCAGCGGCTTTACCTGGAATGGAAAGCACACAGGACAGAAGCAGAGAAGA
CATGATTGACATTAAACTGGAAAAGCCTCAGGAGCAACCAGTTAGTGAAGGAGGCTGTTCCTGCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000992 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000175582 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000030704 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017098 | possible_ortholog | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000010355 | ortholog_one2one | 6 retrogenes | |
| Pongo abelii | ENSPPYG00000003663 | possible_ortholog | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_1743 | 77.44 | 77.40 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_1827 | 87.62 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_itri_1885 | 74.29 | 99.52 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000023497 retrocopies