Parental gene: | LAPTM4A, ENSOPRG00000012401 |
| Aliases: | None |
| Description: | lysosomal protein transmembrane 4 alpha [Source:HGNC Symbol;Acc:6924] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_1510:6192..34902(-) |
>ENSOPRG00000012401
ATGGTGTCCATGACTTTCAAGCGGAGCCGCGGCGACCGGTTCTACAGCGTCCGGTGCTGCGGCTGTTGCCATGTCCGCAC
CGGGACCATCATCCTGGGGACCTGGTACATGGTGGTCAACCTACTGATGGCAATATTGCTGATCGTGGAAGTGACTCATC
CAAACTTAATGCCTGCTGTCAACAACATTCAGTATGAAGTCATCGGTAATTACTACTCATCGGAGAGGATGGCTGATAAT
GTCTGTGTTCTTTTTGCCGTCGCTGTGCTTACGTTTATAATCAGTTCAGTGCTGGTATATGGAGCAATTTTTTACCAAGC
AGGCTGGCTGATCCCGTTCTTCTGTTACCGGCTCTTTGACTTCGTCCTCAGTTGTCTCGTCGCTATCAGTTCTCTCACTT
ACTTGCCAAGGATCGAAGAATATCTGGATCAGTTACCTGATTTTCCCTACAAAGACGACCTCCTGGCCTTGGACTCCAGC
TGCCTCCTGTTCATTGTTCTCATGTTCTGTGTGGTCTTCATTGTCTTTAAGGCTTATCTAATCTACTGTGTTTGGAACTG
CTATAAATATATCAACAGCAGAAACATGCCAGAGATTGCCGTGTACCCTGCCTTTGAAGCACCTCCACAGTATGTGTTGC
CAACCTATGAAATGGCTGTGAAGATGCCTGAGAAAGATCCGCCGCCTCCTTACCTGCCTGCCTGA
ATGGTGTCCATGACTTTCAAGCGGAGCCGCGGCGACCGGTTCTACAGCGTCCGGTGCTGCGGCTGTTGCCATGTCCGCAC
CGGGACCATCATCCTGGGGACCTGGTACATGGTGGTCAACCTACTGATGGCAATATTGCTGATCGTGGAAGTGACTCATC
CAAACTTAATGCCTGCTGTCAACAACATTCAGTATGAAGTCATCGGTAATTACTACTCATCGGAGAGGATGGCTGATAAT
GTCTGTGTTCTTTTTGCCGTCGCTGTGCTTACGTTTATAATCAGTTCAGTGCTGGTATATGGAGCAATTTTTTACCAAGC
AGGCTGGCTGATCCCGTTCTTCTGTTACCGGCTCTTTGACTTCGTCCTCAGTTGTCTCGTCGCTATCAGTTCTCTCACTT
ACTTGCCAAGGATCGAAGAATATCTGGATCAGTTACCTGATTTTCCCTACAAAGACGACCTCCTGGCCTTGGACTCCAGC
TGCCTCCTGTTCATTGTTCTCATGTTCTGTGTGGTCTTCATTGTCTTTAAGGCTTATCTAATCTACTGTGTTTGGAACTG
CTATAAATATATCAACAGCAGAAACATGCCAGAGATTGCCGTGTACCCTGCCTTTGAAGCACCTCCACAGTATGTGTTGC
CAACCTATGAAATGGCTGTGAAGATGCCTGAGAAAGATCCGCCGCCTCCTTACCTGCCTGCCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000020894 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000011200 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000007433 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000002569 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000013714 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000002909 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_356 | 77.58 | 93.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_474 | 77.58 | 93.59 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000012401 retrocopies