Parental gene: | PRPS2, ENSPPYG00000020125 |
| Aliases: | None |
| Description: | Ribose-phosphate pyrophosphokinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5R8F8] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | X:12686090..12720659(+) |
>ENSPPYG00000020125
ATGCCCAACATCGTGCTGTTCAGCGGCAGCTCGCATCAGGACCTGTCCCAGCGCGTGGCCGACCGCCTGGGCCTGGAGCT
GGGCAAGGTGGTCACGAAGAAGTTCAGCAACCAGGAGACCAGCGTGGAGATTGGTGAAAGTGTGAGAGGGGAAGATGTCT
ACATCATCCAGAGCGGCTGCGGGGAAATTAACGACAACCTGATGGAGCTCCTCATCATGATCAACGCCTGCAAGATTGCG
TCATCATCCAGAGTGACTGCCGTGATCCCGTGTTTCCCATACGCCCGACAAGATAAAAAGGACAAGAGTCGTGCCCCAAT
TTCTGCAAAACTTGTGGCCATGCTGTCGGTGGGGGCGGATCACATCATCACCATGGACCTGCATGCTTCTCAGATACAGG
GATTCTTTGATATTCCTGTGGATAATTTGTATGCGGAGCCCGCAGTCCTGCAGTGGATTCGGGAAAACATTGCCGAGTGG
AAGAACTGTATCATTGTTTCACCTGACGCAGGGGGAGCCAAAAGGGTCACATCAATTGCAGACAGGTTGAATGTGGAATT
TGCTTTGATCCACAAAGAGAGGAAGAAGGCGAATGAAGTGGACCGGATGGTCCTGGTGGGCGACGTGAAGGACCGTGTGG
CCATCCTCGTGGATGACATGGCTGACACATGCGGCACCATCTGCCATGCTGCGGACAAGCTGCTGTCAGCTGGAGCCACC
AAAGTGTATGCTATCCTTACCCATGGGATCTTCTCTGGACCAGCTATTTCCAGAATAAATAATGCCGCCTTTGAGGCTGT
TGTCGTCACAAACACAATTCCGCAAGAGGACAAAATGAAACACTGCACCAAGATTCAGGTCATTGACATTTCCATGATCT
TGGCCGAAGCAATCCGAAGGACACACAATGGGGAATCCGTGTCCTACCTGTTCAGCCACGTCCCGCTATAA
ATGCCCAACATCGTGCTGTTCAGCGGCAGCTCGCATCAGGACCTGTCCCAGCGCGTGGCCGACCGCCTGGGCCTGGAGCT
GGGCAAGGTGGTCACGAAGAAGTTCAGCAACCAGGAGACCAGCGTGGAGATTGGTGAAAGTGTGAGAGGGGAAGATGTCT
ACATCATCCAGAGCGGCTGCGGGGAAATTAACGACAACCTGATGGAGCTCCTCATCATGATCAACGCCTGCAAGATTGCG
TCATCATCCAGAGTGACTGCCGTGATCCCGTGTTTCCCATACGCCCGACAAGATAAAAAGGACAAGAGTCGTGCCCCAAT
TTCTGCAAAACTTGTGGCCATGCTGTCGGTGGGGGCGGATCACATCATCACCATGGACCTGCATGCTTCTCAGATACAGG
GATTCTTTGATATTCCTGTGGATAATTTGTATGCGGAGCCCGCAGTCCTGCAGTGGATTCGGGAAAACATTGCCGAGTGG
AAGAACTGTATCATTGTTTCACCTGACGCAGGGGGAGCCAAAAGGGTCACATCAATTGCAGACAGGTTGAATGTGGAATT
TGCTTTGATCCACAAAGAGAGGAAGAAGGCGAATGAAGTGGACCGGATGGTCCTGGTGGGCGACGTGAAGGACCGTGTGG
CCATCCTCGTGGATGACATGGCTGACACATGCGGCACCATCTGCCATGCTGCGGACAAGCTGCTGTCAGCTGGAGCCACC
AAAGTGTATGCTATCCTTACCCATGGGATCTTCTCTGGACCAGCTATTTCCAGAATAAATAATGCCGCCTTTGAGGCTGT
TGTCGTCACAAACACAATTCCGCAAGAGGACAAAATGAAACACTGCACCAAGATTCAGGTCATTGACATTTCCATGATCT
TGGCCGAAGCAATCCGAAGGACACACAATGGGGAATCCGTGTCCTACCTGTTCAGCCACGTCCCGCTATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 16 .48 RPM |
| SRP007412_cerebellum | 6 .08 RPM |
| SRP007412_heart | 2 .86 RPM |
| SRP007412_kidney | 28 .21 RPM |
| SRP007412_liver | 9 .43 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000011662 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000003885 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000005166 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000026323 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000017334 | possible_ortholog | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000016087 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000001197 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000020612 | within_species_paralog | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000009452 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000007710 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006056 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000009917 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000003226 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3431 | 88.20 | 55.70 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000020125 retrocopies