Parental gene:

PRPS2, ENSPPYG00000020125

Aliases:None
Description:Ribose-phosphate pyrophosphokinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5R8F8]
Organism:Orangutan (Pongo abelii)
Coordinates:X:12686090..12720659(+)


>ENSPPYG00000020125
ATGCCCAACATCGTGCTGTTCAGCGGCAGCTCGCATCAGGACCTGTCCCAGCGCGTGGCCGACCGCCTGGGCCTGGAGCT
GGGCAAGGTGGTCACGAAGAAGTTCAGCAACCAGGAGACCAGCGTGGAGATTGGTGAAAGTGTGAGAGGGGAAGATGTCT
ACATCATCCAGAGCGGCTGCGGGGAAATTAACGACAACCTGATGGAGCTCCTCATCATGATCAACGCCTGCAAGATTGCG
TCATCATCCAGAGTGACTGCCGTGATCCCGTGTTTCCCATACGCCCGACAAGATAAAAAGGACAAGAGTCGTGCCCCAAT
TTCTGCAAAACTTGTGGCCATGCTGTCGGTGGGGGCGGATCACATCATCACCATGGACCTGCATGCTTCTCAGATACAGG
GATTCTTTGATATTCCTGTGGATAATTTGTATGCGGAGCCCGCAGTCCTGCAGTGGATTCGGGAAAACATTGCCGAGTGG
AAGAACTGTATCATTGTTTCACCTGACGCAGGGGGAGCCAAAAGGGTCACATCAATTGCAGACAGGTTGAATGTGGAATT
TGCTTTGATCCACAAAGAGAGGAAGAAGGCGAATGAAGTGGACCGGATGGTCCTGGTGGGCGACGTGAAGGACCGTGTGG
CCATCCTCGTGGATGACATGGCTGACACATGCGGCACCATCTGCCATGCTGCGGACAAGCTGCTGTCAGCTGGAGCCACC
AAAGTGTATGCTATCCTTACCCATGGGATCTTCTCTGGACCAGCTATTTCCAGAATAAATAATGCCGCCTTTGAGGCTGT
TGTCGTCACAAACACAATTCCGCAAGAGGACAAAATGAAACACTGCACCAAGATTCAGGTCATTGACATTTCCATGATCT
TGGCCGAAGCAATCCGAAGGACACACAATGGGGAATCCGTGTCCTACCTGTTCAGCCACGTCCCGCTATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 16 .48 RPM
SRP007412_cerebellum 6 .08 RPM
SRP007412_heart 2 .86 RPM
SRP007412_kidney 28 .21 RPM
SRP007412_liver 9 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000011662 ortholog_one2one 2 retrogenes
retro_cfam_1037, retro_cfam_1433,
Callithrix jacchus ENSCJAG00000003885 ortholog_one2one 1 retrogene
retro_cjac_364,
Echinops telfairi ENSETEG00000005166 ortholog_one2one 2 retrogenes
retro_etel_1613, retro_etel_669,
Felis catus ENSFCAG00000026323 ortholog_one2many 1 retrogene
retro_fcat_527,
Monodelphis domestica ENSMODG00000017334 possible_ortholog 4 retrogenes
retro_mdom_1323, retro_mdom_1359, retro_mdom_258, retro_mdom_834,
Otolemur garnettii ENSOGAG00000016087 ortholog_one2one 1 retrogene
retro_ogar_1440,
Procavia capensis ENSPCAG00000001197 ortholog_one2one 2 retrogenes
retro_pcap_219, retro_pcap_292,
Pongo abelii ENSPPYG00000020612 within_species_paralog 2 retrogenes
retro_pabe_3061, retro_pabe_46,
Pteropus vampyrus ENSPVAG00000009452 ortholog_one2one 1 retrogene
retro_pvam_1224,
Sorex araneus ENSSARG00000007710 ortholog_one2one 1 retrogene
retro_sara_18,
Ictidomys tridecemlineatus ENSSTOG00000006056 ortholog_one2one 1 retrogene
retro_itri_1668,
Tupaia belangeri ENSTBEG00000009917 ortholog_one2one 1 retrogene
retro_tbel_1245,
Tursiops truncatus ENSTTRG00000003226 ortholog_one2one 1 retrogene
retro_ttru_1494,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3431 88.20 55.70
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Download FASTA sequences of all ENSPPYG00000020125 retrocopies