Parental gene:

SLC2A3, ENSPTRG00000004626

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:12:8156491..8173579(-)


>ENSPTRG00000004626
ATGGGGACACAGAAGGTCACCCCAGCTCTGATCTTTGCCATCACAGTTGCTACAATCGGCTCTTTCCAATTTGGCTACAA
CACTGGGGTCATCAATGCTCCTGAGAAGATCATAAAGGAATTTATCAATAAAACTTTGACGGACAAGGGAAATGCCCCAC
CCTCTGAGGTGCTGCTCACGAATCTCTGGTCCTTGTCTGTGGCCATATTCTCCATCGGGGGTATGATCGGCTCCTTTTCC
GTCGGACTCTTCGTCAACCGCTTTGGCAGGCGCAATTCAATGCTGATTGTCAACCTGTTGGCTGTCACTGGTGGCTGCTT
TATGGGACTGTGTAAAGTAGCTAAGTCGGTTGAAATGCTGATCCTGGGTCGCTTGGTTATTGGCCTCTTCTGCGGACTCT
GCACAGGTTTTGTGCCCATGTACATTGGAGAGATCTCGCCTACTGCCCTGCGGGGTGCCTTTGGCACTCTCAACCAGCTG
GGCATCGTTGTTGGAATTCTGGTGGCCCAGATCTTTGGTCTGGAATTCATCCTTGGGTCTGAAGAGCTATGGCCGCTGCT
ACTGGGTTTTACCATCCTTCCTGCTATCCTACAAAGTGCAGCCCTTCCATTTTGCCCTGAAAGTCCCAGATTTTTGCTCA
TTAACAGAAAAGAAGAGGAGAATGCTAAGCAGATCCTCCAGCGGTTGTGGGGCACCCAGGATGTATCCCAAGACATCCAG
GAGATGAAAGATGAGAGTGCAAGGATGTCACAAGAAAAGCAAGTCACCGTGCTGGAGCTCTTTAGAGTGTCCAGCTACCG
ACAGCCCATCATCATTTCCATTGTGCTCCAGCTCTCTCAGCAGCTCTCTGGGATCAATGCTGTGTTCTATTACTCAACAG
GAATCTTCAAGGATGCAGGTGTTCAAGAGCCCATCTATGCCACCATCGGCGCGGGTGTGGTTAATACTATCTTCACTGTA
GTTTCTCTATTTCTGGTGGAAAGGGCAGGAAGAAGGACTCTGCATATGATAGGCCTTGGAGGGATGGCTTTTTGTTCCAC
GCTCATGACTGTTTCTTTGTTATTAAAGGATAACTATAATGGGATGAGCTTTGTCTGTATTGGGGCTATCTTGGTCTTTG
TGGCCTTTTTTGAAATTGGACCAGGCCCCATTCCCTGGTTTATTGTGGCCGAACTCTTCAGCCAGGGCCCCCGCCCAGCT
GCGATGGCAGTGGCCGGCTGCTCCAACTGGACCTCCAACTTCCTAGTCGGATTGCTCTTCCCCTCTGCTGCTCACTATTT
AGGAGCCTACGTTTTTATTATCTTCACCGGCTTCCTCATTACCTTCTTGGCTTTTACCTTCTTCAAAGTCCCTGAGACCC
GTGGCAGGACTTTTGAGGATATCACACGGGCCTTTGAAGGGCAGGCACACGGTGCAGATAGATCTGGAAAGGACGGCGTC
ATGGAGATGAACAGCATCGAGCCTGCTAAGGAGACCACCACCAATGTCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 71 .93 RPM
SRP007412_cerebellum 70 .77 RPM
SRP007412_heart 11 .22 RPM
SRP007412_kidney 26 .52 RPM
SRP007412_liver 10 .80 RPM
SRP007412_testis 27 .19 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000004556 ortholog_one2many 2 retrogenes
retro_btau_708, retro_btau_709,
Callithrix jacchus ENSCJAG00000018988 ortholog_one2many 1 retrogene
retro_cjac_446,
Cavia porcellus ENSCPOG00000003074 ortholog_many2many 1 retrogene
retro_cpor_761,
Cavia porcellus ENSCPOG00000009834 ortholog_many2many 1 retrogene
retro_cpor_760,
Cavia porcellus ENSCPOG00000011295 ortholog_many2many 1 retrogene
retro_cpor_587,
Felis catus ENSFCAG00000001625 ortholog_one2many 1 retrogene
retro_fcat_1924,
Homo sapiens ENSG00000059804 ortholog_one2one 2 retrogenes
retro_hsap_3983, retro_hsap_401,
Gorilla gorilla ENSGGOG00000016813 ortholog_one2one 1 retrogene
retro_ggor_398,
Macaca mulatta ENSMMUG00000000439 ortholog_one2many 2 retrogenes
retro_mmul_2301, retro_mmul_502,
Nomascus leucogenys ENSNLEG00000026903 ortholog_many2many 2 retrogenes
retro_nleu_1572, retro_nleu_1904,
Oryctolagus cuniculus ENSOCUG00000008575 ortholog_many2many 1 retrogene
retro_ocun_352,
Pongo abelii ENSPPYG00000004235 ortholog_one2one 1 retrogene
retro_pabe_315,
Pan troglodytes ENSPTRG00000004624 within_species_paralog 1 retrogene
retro_ptro_2703,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_307 83.67 99.80
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPTRG00000004626 retrocopies