Parental gene:

SPPL3, ENSPTRG00000005548

Aliases:None
Description:Pan troglodytes signal peptide peptidase like 3 (SPPL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001246615]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:12:121388526..121525389(-)


>ENSPTRG00000005548
ATGGCGGAGCAGACCTACTCGTGGGCCTATTCCCTGGTGGATTCCAGTCAAGTGTCTACATTTCTGATTTCCATTCTTCT
TATAGTCTATGGTAGTTTCAGGTCCCTTAATATGGACTTTGAAAATCAAGATAAGGAGAAAGACAGTAATAGTTCTTCTG
GGTCTTTCAATGGCAACAGCACCAATAATAGCATCCAAACAATTGACTCTACCCAGGCTCTGTTCCTTCCAATTGGAGCA
TCTGTTTCTCTTCTAGTAATGTTCTTCTTCTTTGACTCAGTTCAAGTAGTTTTTACAATATGTACAGCAGTTCTTGCAAC
AATAGCTTTTGCTTTTCTTCTCCTCCCGATGTGCCAGTATTTAACAAGACCCTGCTCACCTCAGAACAAGATTTCCTTTG
GTTGCTGTGGACGTTTCACTGCTGCTGAGTTGCTGTCATTCTCTCTGTCTGTCATGCTCGTCCTCATCTGGGTTCTCACT
GGCCATTGGCTTCTCATGGATGCACTGGCCATGGGCCTCTGTGTCGCCATGATCGCCTTTGTCCGCCTGCCGAGCCTCAA
GGTCTCCTGCCTGCTTCTCTCAGGGCTTCTCATCTATGATGTCTTTTGGGTATTTTTCTCAGCCTACATCTTCAATAGCA
ACGTCATGGTGAAGGTGGCCACTCAGCCGGCTGACAATCCCCTTGACGTTCTATCCCGGAAGCTCCACCTGGGGCCCAAT
GTTGGGCGTGATGTTCCTCGCCTGTCTCTGCCTGGAAAACTGGTCTTCCCAAGCTCCACTGGCAGCCACTTCTCCATGTT
GGGCATCGGAGACATCGTTATGCCTGGTCTCCTACTATGCTTTGTCCTTCGCTATGACAACTACAAAAAACAAGCCAGTG
GGGACTCCTGTGGGGCCCCTGGACCTGCCAACATCTCCGGGCGCATGCAGAAGGTCTCCTACTTTCACTGCACCCTCATC
GGATACTTTGTAGGCCTGCTCACTGCTACTGTGGCGTCTCGCATTCACCGGGCCGCCCAGCCCGCCCTTCTCTATTTGGT
GCCATTTACTTTATTGCCACTCCTCACGATGGCCTATTTAAAGGGCGACCTCCGGCGGATGTGGTCTGAGCCTTTCCACT
CCAAGTCCAGCAGCTCCCGATTCCTGGAAGTATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 43 .51 RPM
SRP007412_cerebellum 37 .28 RPM
SRP007412_heart 11 .95 RPM
SRP007412_kidney 35 .98 RPM
SRP007412_liver 16 .14 RPM
SRP007412_testis 55 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000016589 ortholog_one2one 1 retrogene
retro_dnov_175,
Homo sapiens ENSG00000157837 ortholog_one2one 1 retrogene
retro_hsap_1898,
Gorilla gorilla ENSGGOG00000016245 ortholog_one2one 1 retrogene
retro_ggor_1392,
Myotis lucifugus ENSMLUG00000012754 ortholog_one2one 1 retrogene
retro_mluc_672,
Macaca mulatta ENSMMUG00000020650 ortholog_one2one 1 retrogene
retro_mmul_1359,
Pongo abelii ENSPPYG00000005041 ortholog_one2one 2 retrogenes
retro_pabe_1578, retro_pabe_1579,
Pan troglodytes ENSPTRG00000007070 within_species_paralog 1 retrogene
retro_ptro_1054,
Rattus norvegicus ENSRNOG00000001178 ortholog_one2one 1 retrogene
retro_rnor_2157,
Sarcophilus harrisii ENSSHAG00000015326 ortholog_one2one 1 retrogene
retro_shar_660,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1275 78.26 89.06
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Download FASTA sequences of all ENSPTRG00000005548 retrocopies