Parental gene: | TIPIN, ENSPTRG00000007192 |
| Aliases: | None |
| Description: | TIMELESS interacting protein [Source:HGNC Symbol;Acc:30750] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 15:63811434..63831389(-) |
>ENSPTRG00000007192
ATGCTAGAACCACAGGAGAATGGCATGATTGACCTACCAGATTATGAGCATGTAGAAGATGAAACTTTTCCTCCTTTCCC
ACCTCCAGCCTCTCCAGAGAGACAAGATGGTGAAGGAACTGAGCCTGATGAAGAGTCAGGAAATGCAGCACCTGTTCCTG
TACCTCCAAAGAGAACAGTTAAAAGAAATATACCCAAGCTGGATGCTCAGAGATTAATTTCAGAGAGAGGACTTCCAGCC
TTAAGGCATGTATTTGATAAGGCAAAATTCAAAGGTAAAGGTCATGAGGCTGAAGACTTGAAGATGCTAATCAGACACAT
GGAGCACTGGGCACATAGGCTATTCCCTAAACTGCAGTTTGAGGATTTTATTGACAGAGTTGAATACCTGGGAAGTAAAA
AGGAAGTTCAGACCTTAAAACGAATTCGACTTGATCCTCCTATTTTACATGAAGATTTTGTTAGCAATAATGATGAAGTT
GCGGAGAATAATGAACATGATGTCACTTCTACTGAATTAGATCCCTTTCTGACAAACTTATCTGAAAGTGAGATGTTTGC
TTCTGAGTTAAGTAGAAGCCTAACAGAAGAGCAACAACAAAGAATTGAGAGAAATAAACAACTGGCCTTGGAAAGAAGGC
AGGCAAAGCTGCTGAGTAATAGTCAGACCCTAGGAAATGATATGTTAATGAATACACCTAGGGCACACACGGTTGAAGAG
GTTAATACTGATGAGGATCAAAAGGAGGAGTCAAATGGATTAAACGAAGACATTCTGGACAATCCATGTAATGATGCTAT
TGCCAATACTTTAAATGAAGAGGAAACACTGCTGGACCAGTCTTTTAAAAATGTGCAACAGCAACTTGATGCTACATCCA
GAAATATTACTGAAGCTAGATAA
ATGCTAGAACCACAGGAGAATGGCATGATTGACCTACCAGATTATGAGCATGTAGAAGATGAAACTTTTCCTCCTTTCCC
ACCTCCAGCCTCTCCAGAGAGACAAGATGGTGAAGGAACTGAGCCTGATGAAGAGTCAGGAAATGCAGCACCTGTTCCTG
TACCTCCAAAGAGAACAGTTAAAAGAAATATACCCAAGCTGGATGCTCAGAGATTAATTTCAGAGAGAGGACTTCCAGCC
TTAAGGCATGTATTTGATAAGGCAAAATTCAAAGGTAAAGGTCATGAGGCTGAAGACTTGAAGATGCTAATCAGACACAT
GGAGCACTGGGCACATAGGCTATTCCCTAAACTGCAGTTTGAGGATTTTATTGACAGAGTTGAATACCTGGGAAGTAAAA
AGGAAGTTCAGACCTTAAAACGAATTCGACTTGATCCTCCTATTTTACATGAAGATTTTGTTAGCAATAATGATGAAGTT
GCGGAGAATAATGAACATGATGTCACTTCTACTGAATTAGATCCCTTTCTGACAAACTTATCTGAAAGTGAGATGTTTGC
TTCTGAGTTAAGTAGAAGCCTAACAGAAGAGCAACAACAAAGAATTGAGAGAAATAAACAACTGGCCTTGGAAAGAAGGC
AGGCAAAGCTGCTGAGTAATAGTCAGACCCTAGGAAATGATATGTTAATGAATACACCTAGGGCACACACGGTTGAAGAG
GTTAATACTGATGAGGATCAAAAGGAGGAGTCAAATGGATTAAACGAAGACATTCTGGACAATCCATGTAATGATGCTAT
TGCCAATACTTTAAATGAAGAGGAAACACTGCTGGACCAGTCTTTTAAAAATGTGCAACAGCAACTTGATGCTACATCCA
GAAATATTACTGAAGCTAGATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 1 .29 RPM |
| SRP007412_cerebellum | 2 .08 RPM |
| SRP007412_heart | 0 .76 RPM |
| SRP007412_kidney | 1 .39 RPM |
| SRP007412_liver | 1 .44 RPM |
| SRP007412_testis | 14 .44 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000004860 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000003177 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000075131 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000000061 | ortholog_one2one | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000026016 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000004386 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000003695 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012909 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000043068 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1145 | 86.55 | 73.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_3220 | 84.75 | 58.67 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000007192 retrocopies