Parental gene: | GOT2, ENSPTRG00000008185 |
| Aliases: | None |
| Description: | Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:H2QB89] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 16:57830374..57857870(-) |
>ENSPTRG00000008185
ATGGCCCTGCTGCACTCCGGCCGCGTCCTCCCCGGGATCGCCGCCGCCTTCCACCCGGGCCTCGCCGCCGCGGCCTCTGC
CAGAGCCAGCTCCTGGTGGACCCATGTGGAAATGGGACCTCCAGATCCCATTCTGGGAGTCACTGAAGCCTTTAAGAGGG
ACACCAATAGCAAAAAGATGAATCTGGGAGTTGGTGCCTACCGGGATGATAACGGAAAGCCTTACGTGCTGCCTAGCGTC
CGCAAGGCAGAGGCCCAGATTGCCGCAAAAAATTTGGACAAGGAATACCTGCCCATTGGGGGACTGGCTGAATTTTGCAA
GGCATCTGCAGAACTAGCCCTGGGTGAGAACAGCGAAGTCTTGAAGAGTGGCCGGTTTGTCACTGTGCAGACCATTTCTG
GAACTGGAGCCTTAAGGATCGGAGCCAGTTTTCTGCAAAGATTTTTTAAGTTCAGCCGAGATGTCTTTCTGCCCAAACCA
ACCTGGGGAAACCACACACCCATCTTCAGGGATGCTGGCATGCAGCTACAAGGTTATCGGTATTATGACCCCAAGACTTG
CGGTTTTGACTTCACAGGCGCTGTGGAGGATATTTCAAAAATACCAGAGCAGAGTGTTCTTCTTCTGCATGCCTGCGCCC
ACAATCCCACAGGAGTGGACCCGCGTCCGGAACAGTGGAAGGAAATAGCAACAGTGGTGAAGAAAAGGAATCTCTTTGCG
TTCTTTGACATGGCCTACCAAGGCTTTGCCAGTGGTGATGGTGATAAGGATGCCTGGGCTGTGCGCCACTTCATCGAACA
GGGCATTAATGTTTGTCTCTGCCAATCATATGCCAAGAACATGGGCTTATATGGTGAGCGTGTAGGAGCCTTCACTATGG
TCTGCAAAGATGCGGATGAAGCCAAAAGGGTAGAGTCACAGTTGAAGATCTTGATCCGTCCCATGTATTCCAACCCTCCC
CTCAATGGGGCCCGGATTGCTGCTGCCATTCTGAACACCCCAGATTTGCGAAAACAATGGCTGCAAGAAGTGAAAGGCAT
GGCCGACCGTATCATTGGCATGCGGACTCAACTGGTCTCCAACCTCAAGAAGGAGGGTTCCACCCACAACTGGCAACACA
TCACCGACCAAATTGGCATGTTCTGTTTCACAGGGCTAAAGCCTGAACAGGTGGAGCGGCTGATCAAGGAGTTCTCCATC
TACATGACAAAAGATGGCCGCATCTCTGTGGCAGGGGTCACCTCCAGCAACGTGGGCTACCTTGCCCATGCCATTCACCA
GGTCACCAAGTAA
ATGGCCCTGCTGCACTCCGGCCGCGTCCTCCCCGGGATCGCCGCCGCCTTCCACCCGGGCCTCGCCGCCGCGGCCTCTGC
CAGAGCCAGCTCCTGGTGGACCCATGTGGAAATGGGACCTCCAGATCCCATTCTGGGAGTCACTGAAGCCTTTAAGAGGG
ACACCAATAGCAAAAAGATGAATCTGGGAGTTGGTGCCTACCGGGATGATAACGGAAAGCCTTACGTGCTGCCTAGCGTC
CGCAAGGCAGAGGCCCAGATTGCCGCAAAAAATTTGGACAAGGAATACCTGCCCATTGGGGGACTGGCTGAATTTTGCAA
GGCATCTGCAGAACTAGCCCTGGGTGAGAACAGCGAAGTCTTGAAGAGTGGCCGGTTTGTCACTGTGCAGACCATTTCTG
GAACTGGAGCCTTAAGGATCGGAGCCAGTTTTCTGCAAAGATTTTTTAAGTTCAGCCGAGATGTCTTTCTGCCCAAACCA
ACCTGGGGAAACCACACACCCATCTTCAGGGATGCTGGCATGCAGCTACAAGGTTATCGGTATTATGACCCCAAGACTTG
CGGTTTTGACTTCACAGGCGCTGTGGAGGATATTTCAAAAATACCAGAGCAGAGTGTTCTTCTTCTGCATGCCTGCGCCC
ACAATCCCACAGGAGTGGACCCGCGTCCGGAACAGTGGAAGGAAATAGCAACAGTGGTGAAGAAAAGGAATCTCTTTGCG
TTCTTTGACATGGCCTACCAAGGCTTTGCCAGTGGTGATGGTGATAAGGATGCCTGGGCTGTGCGCCACTTCATCGAACA
GGGCATTAATGTTTGTCTCTGCCAATCATATGCCAAGAACATGGGCTTATATGGTGAGCGTGTAGGAGCCTTCACTATGG
TCTGCAAAGATGCGGATGAAGCCAAAAGGGTAGAGTCACAGTTGAAGATCTTGATCCGTCCCATGTATTCCAACCCTCCC
CTCAATGGGGCCCGGATTGCTGCTGCCATTCTGAACACCCCAGATTTGCGAAAACAATGGCTGCAAGAAGTGAAAGGCAT
GGCCGACCGTATCATTGGCATGCGGACTCAACTGGTCTCCAACCTCAAGAAGGAGGGTTCCACCCACAACTGGCAACACA
TCACCGACCAAATTGGCATGTTCTGTTTCACAGGGCTAAAGCCTGAACAGGTGGAGCGGCTGATCAAGGAGTTCTCCATC
TACATGACAAAAGATGGCCGCATCTCTGTGGCAGGGGTCACCTCCAGCAACGTGGGCTACCTTGCCCATGCCATTCACCA
GGTCACCAAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 138 .46 RPM |
| SRP007412_cerebellum | 112 .85 RPM |
| SRP007412_heart | 262 .90 RPM |
| SRP007412_kidney | 113 .84 RPM |
| SRP007412_liver | 156 .40 RPM |
| SRP007412_testis | 23 .92 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017346 | possible_ortholog | 3 retrogenes | |
| Canis familiaris | ENSCAFG00000008357 | possible_ortholog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000011234 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000125166 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000005767 | ortholog_one2one | 3 retrogenes | |
| Microcebus murinus | ENSMICG00000008954 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006000 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000004862 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007413 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000011782 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_354 | 86.19 | 84.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_665 | 82.72 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_670 | 84.26 | 54.42 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_3115 | 73.64 | 55.12 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000008185 retrocopies