Parental gene: | GOT2, ENSGGOG00000005767 |
| Aliases: | None |
| Description: | Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:G3QSK6] |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 16:48675162..48702422(-) |
>ENSGGOG00000005767
ATGGCCCTGCTGCACTCCGGCCGCGTCCTCCCCGGGATCGCCGCCGCCTTCCACCCGGGCCTCGCCGCCGCGGCCTCTGC
CAGAGCCAGCTCCTGGTGGACCCATGTGGAAATGGGACCTCCAGATCCCATTCTGGGAGTCACTGAAGCCTTTAAGAGGG
ACACCAATAGCAAAAAGATGAATCTGGGAGTTGGTGCCTACCGGGATGATAACGGAAAGCCTTACGTGCTGCCTAGCGTC
CGCAAGGCAGAGGCCCAGATTGCCGCAAAAAATTTGGACAAGGAATACCTGCCCATTGGGGGACTGGCTGAATTTTGCAA
GGCATCTGCAGAACTAGCCCTGGGTGAGAACAGCGAAGTCTTGAAGAGTGGCCGGTTTGTCACTGTGCAGACCATTTCTG
GAACTGGAGCCTTAAGGATTGGAGCCAGTTTTCTGCAAAGATTTTTTAAGTTCAGCCGAGATGTCTTTCTGCCCAAACCA
ACCTGGGGAAACCACACACCCATCTTCAGGGATGCTGGCATGCAGCTACAAGGTTATCGGTATTATGACCCCAAGACTTG
CGGTTTTGACTTCACAGGCGCTGTGGAGGATATTTCAAAAATACCAGAGCAGAGTGTTCTAATTCTGCATGCCTGCGCCC
ACAATCCCACGGGAGTGGACCCGCGTCCGGAACAGTGGAAGGAAATAGCAACAGTGGTGAAGAAAAGGAATCTCTTTGCG
TTCTTTGACATGGCCTACCAAGGCTTTGCCAGTGGTGATGGTGATAAGGATGCCTGGGCTGTGCGCCACTTCATCGAACA
GGGCATTAATGTTTGTCTCTGCCAATCATATGCCAAGAACATGGGCTTATATGGTGAGCGTGTAGGAGCCTTCACTATGG
TCTGCAAAGATGCGGATGAAGCCAAAAGGGTAGAGTCACAGTTGAAGATCTTGATCCGTCCCATGTATTCCAACCCTCCC
CTCAATGGGGCCCGGATTGCTGCTGCCATTCTGAACACCCCAGATTTGCGAAAACAATGGCTGCAAGAAGTGAAAGGCAT
GGCCGACCGCATCATTGGCATGCGGACTCAACTGGTCTCCAACCTCAAGAAGGAGGGTTCCGCCCACAACTGGCAACACA
TCACCGACCAAATTGGCATGTTCTGTTTCACAGGGCTAAAGCCTGAACAGGTGGAGCGGCTGATCAAGGAGTTCTCCATT
TACATGACAAAAGACGGCCGCATCTCTGTGGCAGGAGTCACCTCCAGCAACGTGGGCTACCTTGCCCATGCCATTCACCA
GGTCACCAAGTAA
ATGGCCCTGCTGCACTCCGGCCGCGTCCTCCCCGGGATCGCCGCCGCCTTCCACCCGGGCCTCGCCGCCGCGGCCTCTGC
CAGAGCCAGCTCCTGGTGGACCCATGTGGAAATGGGACCTCCAGATCCCATTCTGGGAGTCACTGAAGCCTTTAAGAGGG
ACACCAATAGCAAAAAGATGAATCTGGGAGTTGGTGCCTACCGGGATGATAACGGAAAGCCTTACGTGCTGCCTAGCGTC
CGCAAGGCAGAGGCCCAGATTGCCGCAAAAAATTTGGACAAGGAATACCTGCCCATTGGGGGACTGGCTGAATTTTGCAA
GGCATCTGCAGAACTAGCCCTGGGTGAGAACAGCGAAGTCTTGAAGAGTGGCCGGTTTGTCACTGTGCAGACCATTTCTG
GAACTGGAGCCTTAAGGATTGGAGCCAGTTTTCTGCAAAGATTTTTTAAGTTCAGCCGAGATGTCTTTCTGCCCAAACCA
ACCTGGGGAAACCACACACCCATCTTCAGGGATGCTGGCATGCAGCTACAAGGTTATCGGTATTATGACCCCAAGACTTG
CGGTTTTGACTTCACAGGCGCTGTGGAGGATATTTCAAAAATACCAGAGCAGAGTGTTCTAATTCTGCATGCCTGCGCCC
ACAATCCCACGGGAGTGGACCCGCGTCCGGAACAGTGGAAGGAAATAGCAACAGTGGTGAAGAAAAGGAATCTCTTTGCG
TTCTTTGACATGGCCTACCAAGGCTTTGCCAGTGGTGATGGTGATAAGGATGCCTGGGCTGTGCGCCACTTCATCGAACA
GGGCATTAATGTTTGTCTCTGCCAATCATATGCCAAGAACATGGGCTTATATGGTGAGCGTGTAGGAGCCTTCACTATGG
TCTGCAAAGATGCGGATGAAGCCAAAAGGGTAGAGTCACAGTTGAAGATCTTGATCCGTCCCATGTATTCCAACCCTCCC
CTCAATGGGGCCCGGATTGCTGCTGCCATTCTGAACACCCCAGATTTGCGAAAACAATGGCTGCAAGAAGTGAAAGGCAT
GGCCGACCGCATCATTGGCATGCGGACTCAACTGGTCTCCAACCTCAAGAAGGAGGGTTCCGCCCACAACTGGCAACACA
TCACCGACCAAATTGGCATGTTCTGTTTCACAGGGCTAAAGCCTGAACAGGTGGAGCGGCTGATCAAGGAGTTCTCCATT
TACATGACAAAAGACGGCCGCATCTCTGTGGCAGGAGTCACCTCCAGCAACGTGGGCTACCTTGCCCATGCCATTCACCA
GGTCACCAAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 135 .85 RPM |
| SRP007412_cerebellum | 78 .64 RPM |
| SRP007412_heart | 210 .01 RPM |
| SRP007412_kidney | 123 .16 RPM |
| SRP007412_liver | 271 .77 RPM |
| SRP007412_testis | 78 .94 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017346 | possible_ortholog | 3 retrogenes | |
| Canis familiaris | ENSCAFG00000008357 | possible_ortholog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000011234 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000016504 | possible_ortholog | 1 retrogene | |
| Felis catus | ENSFCAG00000025552 | possible_ortholog | 3 retrogenes | |
| Homo sapiens | ENSG00000125166 | ortholog_one2one | 4 retrogenes | |
| Macropus eugenii | ENSMEUG00000012574 | possible_ortholog | 1 retrogene | |
| Microcebus murinus | ENSMICG00000008954 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006000 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000004862 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000031672 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000003871 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000000551 | possible_ortholog | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000007413 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000008185 | ortholog_one2one | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000011782 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000001808 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_449 | 86.19 | 84.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_774 | 80.77 | 71.63 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_2912 | 74.06 | 55.12 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000005767 retrocopies