Parental gene:

Got2, ENSRNOG00000011782

Aliases:Got2, ASPATA
Description:Aspartate aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P00507]
Organism:Rat (Rattus norvegicus)
Coordinates:19:9572756..9598443(+)


>ENSRNOG00000011782
ATGGCCCTCCTGCACTCCGGTCGCGTCCTCTCCGGGATGGCTGCTGCCTTTCACCCAGGCCTTGCAGCCGCAGCCTCTGC
CAGAGCCAGCTCCTGGTGGACCCATGTTGAAATGGGACCTCCAGATCCCATCCTGGGAGTGACCGAAGCCTTCAAGAGAG
ATACCAACAGCAAGAAGATGAACCTGGGAGTTGGTGCCTACCGGGACGATAACGGAAAGCCTTACGTGCTCCCCAGTGTT
CGGAAGGCAGAGGCCCAGATTGCTGGGAAAAATTTGGACAAAGAATACCTACCCATCGGGGGACTGGCTGATTTTTGTAA
GGCTTCTGCAGAACTGGCCCTGGGCGAGAACAGCGAAGTGTTGAAAAGCGGCCGGTTTGTAACTGTGCAGACCATTTCCG
GGACTGGAGCCTTGAGGGTCGGAGCCAGCTTTCTGCAAAGATTTTTTAAGTTCAGCCGAGATGTCTTTCTGCCCAAACCA
TCCTGGGGAAACCACACGCCCATCTTCAGGGATGCCGGCATGCAGCTGCAAGGTTATCGATACTATGACCCCAAGACTTG
CGGCTTTGACTTCTCTGGAGCCTTAGAAGACATATCAAAAATCCCAGAGCAGAGTGTTCTCCTTCTGCACGCCTGCGCTC
ACAACCCCACGGGCGTGGACCCGCGTCCAGAGCAGTGGAAGGAAATGGCGGCGGTGGTGAAGAAAAAGAATCTCTTCGCA
TTCTTTGACATGGCCTACCAAGGCTTTGCCAGCGGCGATGGTGATAAGGACGCCTGGGCCGTGCGGCACTTCATCGAGCA
GGGCATCAATGTCTGCCTCTGCCAATCCTATGCCAAGAACATGGGCCTGTACGGTGAGCGTGTGGGAGCCTTCACTGTGG
TCTGCAAAGATGCAGAAGAAGCCAAAAGGGTGGAGTCACAGCTGAAGATCCTGATCCGCCCCTTGTATTCCAACCCGCCT
CTCAATGGAGCCCGGATCGCCGCAACCATCCTGACTTCTCCAGACTTGCGGAAGCAATGGTTGCAGGAGGTGAAAGGCAT
GGCTGACCGCATCATCAGCATGAGGACCCAGTTGGTCTCCAACCTGAAGAAAGAGGGCTCGTCCCACAACTGGCAGCACA
TCACCGACCAGATCGGCATGTTCTGCTTCACCGGCCTAAAGCCTGAGCAGGTGGAGCGGCTGACCAAGGAGTTCTCAGTC
TACATGACAAAGGATGGTCGAATCTCTGTGGCCGGGGTCACCTCTGGCAATGTGGGCTACCTGGCCCACGCCATTCACCA
GGTCACCAAGTAA

Library Parental gene expression (RPM)
SRP017611_liver 350 .11 RPM
SRP017611_kidney 338 .72 RPM
SRP017611_brain 192 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017346 possible_ortholog 3 retrogenes
retro_amel_1805, retro_amel_815, retro_amel_846,
Canis familiaris ENSCAFG00000008357 possible_ortholog 2 retrogenes
retro_cfam_586, retro_cfam_816,
Callithrix jacchus ENSCJAG00000011234 possible_ortholog 1 retrogene
retro_cjac_2916,
Equus caballus ENSECAG00000016504 possible_ortholog 1 retrogene
retro_ecab_694,
Felis catus ENSFCAG00000025552 possible_ortholog 3 retrogenes
retro_fcat_1068, retro_fcat_1888, retro_fcat_381,
Homo sapiens ENSG00000125166 possible_ortholog 4 retrogenes
retro_hsap_4687, retro_hsap_473, retro_hsap_960, retro_hsap_971,
Gorilla gorilla ENSGGOG00000005767 possible_ortholog 3 retrogenes
retro_ggor_2912, retro_ggor_449, retro_ggor_774,
Macropus eugenii ENSMEUG00000012574 possible_ortholog 1 retrogene
retro_meug_2109,
Microcebus murinus ENSMICG00000008954 possible_ortholog 1 retrogene
retro_mmur_480,
Macaca mulatta ENSMMUG00000006000 possible_ortholog 1 retrogene
retro_mmul_1337,
Mustela putorius furo ENSMPUG00000004862 possible_ortholog 1 retrogene
retro_mputfur_567,
Mus musculus ENSMUSG00000031672 ortholog_one2many 1 retrogene
retro_mmus_2701,
Oryctolagus cuniculus ENSOCUG00000003871 possible_ortholog 1 retrogene
retro_ocun_1516,
Otolemur garnettii ENSOGAG00000000551 possible_ortholog 2 retrogenes
retro_ogar_2182, retro_ogar_827,
Pongo abelii ENSPPYG00000007413 possible_ortholog 3 retrogenes
retro_pabe_3640, retro_pabe_823, retro_pabe_901,
Pan troglodytes ENSPTRG00000008185 possible_ortholog 4 retrogenes
retro_ptro_3115, retro_ptro_354, retro_ptro_665, retro_ptro_670,
Tupaia belangeri ENSTBEG00000001808 possible_ortholog 1 retrogene
retro_tbel_3799,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2695 83.41 99.53
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Download FASTA sequences of all ENSRNOG00000011782 retrocopies