Parental gene:

TRA2A, ENSPTRG00000018988

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:7:22122699..22151767(-)


>ENSPTRG00000018988
ATGAGTGATGTAGAGGAGAACAACTTCGAGGGCAGAGAGTCTCGCTCTCAGTCAAAATCTCCAACGGGAACTCCTGCTCG
TGTAAAATCGGAGAGCAGGTCAGGATCTCGTAGTCCATCAAGGGTTTCCAAACACTCTGAATCCCATTCTCGATCAAGAT
CAAAATCCAGGTCGAGGTCAAGGAGACATTCTCATAGACGTTACACTCGATCCAGATCCCACTCTCACTCTCATAGGAGA
CGATCTCGAAGTAGATCATATACACCAGAATACCGGCGGCGAAGGAGCCGAAGCCATTCTCCAATGTCTAACCGGAGAAG
ACATACTGGCAGCAGGGCAAATCCAGATCCCAACACTTGCCTTGGAGTGTTTGGCCTCAGTCTGTACACAACAGAGAGGG
ATCTTCGTGAAGTATTTTCTCGATATGGACCACTGAGTGGTGTCAATGTGGTTTATGATCAGCGAACTGGGCGATCTCGA
GGATTTGCTTTTGTGTATTTTGAAAGAATAGATGACTCAAAGGAGGCTATGGAAAGGGCAAATGGAATGGAGCTGGATGG
TAGAAGAATTCGGGTGGATTATTCTATAACCAAGAGAGCGCACACACCAACACCAGGCATCTACATGGGCAGACCAACTC
ATAGTGGTGGGGGTGGTGGAGGAGGCGGCGGCGGTGGAGGTGGAGGTGGTGGCAGACGTCGAGATTCTTACTATGATAGA
GGATATGATCGTGGGTATGACAGATATGAAGACTATGATTACCGATACAGAAGACGATCACCTTCTCCTTATTATAGTCG
ATATAGATCACGATCAAGATCTCGTTCCTACAGCCCAAGACGCTATTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 33 .98 RPM
SRP007412_cerebellum 43 .41 RPM
SRP007412_heart 23 .58 RPM
SRP007412_kidney 41 .92 RPM
SRP007412_liver 20 .72 RPM
SRP007412_testis 54 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001130 ortholog_one2one 1 retrogene
retro_chof_974,
Callithrix jacchus ENSCJAG00000001509 ortholog_one2one 1 retrogene
retro_cjac_1759,
Echinops telfairi ENSETEG00000007250 ortholog_one2one 2 retrogenes
retro_etel_323, retro_etel_692,
Homo sapiens ENSG00000164548 ortholog_one2one 1 retrogene
retro_hsap_386,
Gorilla gorilla ENSGGOG00000009053 ortholog_one2one 1 retrogene
retro_ggor_391,
Mustela putorius furo ENSMPUG00000013480 ortholog_one2one 1 retrogene
retro_mputfur_1442,
Nomascus leucogenys ENSNLEG00000014794 ortholog_one2one 1 retrogene
retro_nleu_1481,
Otolemur garnettii ENSOGAG00000009733 ortholog_one2one 3 retrogenes
retro_ogar_1966, retro_ogar_2558, retro_ogar_3027,
Pongo abelii ENSPPYG00000017728 ortholog_one2one 1 retrogene
retro_pabe_324,
Pan troglodytes ENSPTRG00000021864 within_species_paralog 1 retrogene
retro_ptro_222,
Sorex araneus ENSSARG00000012900 ortholog_one2one 1 retrogene
retro_sara_467,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_299 81.77 71.63
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Download FASTA sequences of all ENSPTRG00000018988 retrocopies