Parental gene:

TRA2A, ENSSARG00000012900

Aliases:None
Description:transformer 2 alpha homolog (Drosophila) [Source:HGNC Symbol;Acc:16645]
Organism:Shrew (Sorex araneus)
Coordinates:GeneScaffold_5068:4445..33225(-)


>ENSSARG00000012900
ATGAGCGATCTCGAGGAGAACAACTTCGAGGGCAGAGAGTCTCGCTCTCAGTCAAAATCTCCAACTGGAACACCTGCTCG
TGTAAAATCGGAGAGCAGGTCAGGATCTCGTAGTCCTTCAAGGGTTTCCAAACACTCTGAATCCCACTCTCGATCAAGAT
CAAAATCCAGGTCAAGGTCAAGAAGGCATTCTCATAGACGTTACACTCGATCCAGATCTCATTCTCACTCTCATAGAAGA
CGGTCTCGAAGTAGGTCATATACACCAGAATACCGTCGTCGAAGGAGCCGAAGTCATTCTCCAATGTCTAACCGGAGGAG
ACATACAGGCAGCAGGGCAAATCCAGATCCTAACACCTGTCTTGCAGTGTTTGGCCTCAGTTTATATACCACAGAGAGAG
ATCTTCGGGAAGTGTTTTCTCGATATGGACCATTGAGTGGGGTCAATGTGGTTTATGATCAGCGAACTGGGCGGTCACGA
GGATTTGCTTTCGTTATTTTTGAGAGGATTGATGACTCAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGCGTCGAGATTCATACTATGATAGAGGA
TATGACCGTGGATATGACAGATACGAAGATTATGACTACCGGTACAGAAGAAGATCACCTTCTCCTTACTATAGTCGATA
CAGATCACGATCAAGATCTCGTTCCTACAGCCCAAGACGCTATTGA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001130 ortholog_one2one 1 retrogene
retro_chof_974,
Callithrix jacchus ENSCJAG00000001509 ortholog_one2one 1 retrogene
retro_cjac_1759,
Echinops telfairi ENSETEG00000007250 ortholog_one2one 2 retrogenes
retro_etel_323, retro_etel_692,
Homo sapiens ENSG00000164548 ortholog_one2one 1 retrogene
retro_hsap_386,
Gorilla gorilla ENSGGOG00000009053 ortholog_one2one 1 retrogene
retro_ggor_391,
Mustela putorius furo ENSMPUG00000013480 ortholog_one2one 1 retrogene
retro_mputfur_1442,
Nomascus leucogenys ENSNLEG00000014794 ortholog_one2one 1 retrogene
retro_nleu_1481,
Otolemur garnettii ENSOGAG00000009733 ortholog_one2one 3 retrogenes
retro_ogar_1966, retro_ogar_2558, retro_ogar_3027,
Pongo abelii ENSPPYG00000017728 ortholog_one2one 1 retrogene
retro_pabe_324,
Pan troglodytes ENSPTRG00000018988 ortholog_one2one 1 retrogene
retro_ptro_299,
Sorex araneus ENSSARG00000000397 within_species_paralog 1 retrogene
retro_sara_169,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sara_467 77.16 57.30
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSARG00000012900 retrocopies