Parental gene:

TUBA4A, ENSPVAG00000010798

Aliases:None
Description:tubulin, alpha 4a [Source:HGNC Symbol;Acc:12407]
Organism:Megabat (Pteropus vampyrus)
Coordinates:GeneScaffold_2631:221723..224830(-)


>ENSPVAG00000010798
ATGNNNNNNNNNNNNNNNNTCCATGTGGGGCAGGCAGGTGTCCAGATGGGCAATTGCTGGGAGCTCTATCTGGAACATGG
GATTCAGGATGGGCAAATGCCCAGTGACAAGACCATTGGTGGAGGGGATGATTTCACTACCTTCTTCTGTGAAACCGGCG
CTGGAAAGCACGTGCCCCGGGCAGTTTTTGTGGATTTGGAGCCCACTGTAATTGATGAGATCCGAAATGGTCCATACCGG
CAGCTCTTCCACCCAGAGCAGCTCATCACTGGGAAAGAGGATGCCGCAAATAACTATGCTCGTGGTCACTACACCATCGG
CAAGGAGATCATTGACCCAGTGTTGGACCGGATCCGCAAGCTGTCAGACCAGTGCACAGGACTTCAGGGCTTCCTGGTCT
TCCACAGCTTTGGGGGTGGCACCGGCTCCGGCTTCACCTCGCTCCTGATGGAGCGGCTCTCTGTTGACTATGGCAAGAAA
TCCAAGCTGGAGTTCTCCATCTACCCAGCACCCCAGGTGTCCACAGCCGTGGTCGAGCCCTACAACTCCATCCTGACCAC
CCACACCACCCTGGAGCACTCGGACTGTGCCTTCATGGTGGACAACGAAGCCATCTATGACATCTGCCGCCGCAACCTGG
ACATCGAGCGCCCAACCTACACCAACCTCAACCGCCTCATCAGCCAGATCGTCTCCTCCATCACAGCCTCCCTGCGCTTC
GACGGGGCCCTCAATGTGGACCTGACAGAGTTCCAGACCAACCTGGTGCCCTACCCTCGCATCCACTTCCCCCTGGCCAC
CTATGCACCAGTCATCTCTGCAGAGAAGGCCTACCACGAGCAGCTGTCGGTGGCAGAGATCACCAATGCCTGCTTCGAGC
CTGCCAACCAGATGGTGAAATGTGATCCGCGTCATGGCAAGTACATGGCCTGCTGCCTGCTGTACCGTGGAGACGTGGTG
CCCAAGGATGTCAACGCTGCCATTGCCGCCATCAAGACCAAGCGCAGCATTCAGTTCGTGGACTGGTGCCCCACGGGCTT
CAAGGTTGGTATCAACTACCAGCCACCCACTGTGGTGCCCGGGGGCGACCTGGCCAAGGTGCAGCGTGCTGTGTGCATGC
TGAGCAACACGACCGCCATCGCCGAGGCCTGGGCCCGCCTGGACCACAAGTTCGACCTGATGTACGCCAAGAGGGCATTT
GTGCACTGGTATGTGGGTGAGGGCATGGAGGAGGGTGAGTTCTCTGAGGCCCGGGAGGATATGGCTGCCTTGGAGAAAGA
TTACGAGGAAGTAGGCATCGACTCCTATGAGGACGAGGATGAAGGAGAAGAATAG

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008444 possible_ortholog 2 retrogenes
retro_chof_179, retro_chof_360,
Dipodomys ordii ENSDORG00000000154 ortholog_one2one 3 retrogenes
retro_dord_460, retro_dord_564, retro_dord_786,
Echinops telfairi ENSETEG00000010296 ortholog_one2one 2 retrogenes
retro_etel_1816, retro_etel_1993,
Felis catus ENSFCAG00000027277 ortholog_one2one 1 retrogene
retro_fcat_596,
Felis catus ENSFCAG00000028689 possible_ortholog 3 retrogenes
retro_fcat_1802, retro_fcat_254, retro_fcat_798,
Macropus eugenii ENSMEUG00000010779 possible_ortholog 2 retrogenes
retro_meug_1648, retro_meug_2174,
Microcebus murinus ENSMICG00000000804 ortholog_one2one 1 retrogene
retro_mmur_103,
Otolemur garnettii ENSOGAG00000009435 possible_ortholog 1 retrogene
retro_ogar_240,
Pteropus vampyrus ENSPVAG00000004645 within_species_paralog 2 retrogenes
retro_pvam_1283, retro_pvam_414,
Pteropus vampyrus ENSPVAG00000004646 within_species_paralog 1 retrogene
retro_pvam_929,
Rattus norvegicus ENSRNOG00000003597 ortholog_one2one 1 retrogene
retro_rnor_2819,
Ictidomys tridecemlineatus ENSSTOG00000019497 ortholog_one2one 1 retrogene
retro_itri_203,
Tursiops truncatus ENSTTRG00000010042 ortholog_one2one 1 retrogene
retro_ttru_531,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_1019 74.03 74.32
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Download FASTA sequences of all ENSPVAG00000010798 retrocopies