Parental gene:

RPL31, ENSPVAG00000011716

Aliases:None
Description:ribosomal protein L31 [Source:HGNC Symbol;Acc:10334]
Organism:Megabat (Pteropus vampyrus)
Coordinates:scaffold_625:155269..160618(-)


>ENSPVAG00000011716
ATGGCTCCCGCAAAGAAGGGTAGCGAGAAGAAGAAGGGCCGTTCTGCCATCAACGAGGTGGTGACCAGAGAATATACCAT
CAACATTCACAAGCGCATCCATGGAGTGGGTTTCAAGAAGCGTGCTCCTCGGGCACTCAAAGAGATCCGGAAATTCGCCA
TGAAGGAGATGGGGACTCCAGATGTACGCATCGATACCAGGCTCAACAAGGCCGTCTGGGCCAAAGGGATCAGGAATGTC
CCATACCGTATCCGGGTGCGGTTGTCCAGAAAACGTAACGAAGATGAAGATTCACCTAACAAGCTCTATACATTAGTTAC
CTATGTGCCTGTCACCACTTTCAAAAATCTACAGACAGTTAATGTGGATGAGAACTAA

Species Parental gene accession Homology type Retrogenes number
Latimeria chalumnae ENSLACG00000013603 ortholog_one2one 1 retrogene
retro_lcha_94,
Loxodonta africana ENSLAFG00000027873 ortholog_one2one 12 retrogenes
retro_lafr_118, retro_lafr_187, retro_lafr_20, retro_lafr_245, retro_lafr_307, retro_lafr_56, retro_lafr_663, retro_lafr_703, retro_lafr_710, retro_lafr_778, retro_lafr_885, retro_lafr_926,
Macropus eugenii ENSMEUG00000000963 ortholog_one2one 8 retrogenes
retro_meug_1083, retro_meug_1433, retro_meug_1731, retro_meug_1741, retro_meug_198, retro_meug_418, retro_meug_588, retro_meug_649,
Myotis lucifugus ENSMLUG00000002507 possible_ortholog 21 retrogenes
retro_mluc_1072, retro_mluc_1135, retro_mluc_1239, retro_mluc_1301, retro_mluc_1406, retro_mluc_1470, retro_mluc_1666, retro_mluc_1678, retro_mluc_1896, retro_mluc_1913, retro_mluc_2028, retro_mluc_2124, retro_mluc_2126, retro_mluc_269, retro_mluc_303, retro_mluc_463, retro_mluc_767, retro_mluc_782, retro_mluc_914, retro_mluc_922, retro_mluc_997,
Otolemur garnettii ENSOGAG00000014494 possible_ortholog 10 retrogenes
retro_ogar_103, retro_ogar_143, retro_ogar_150, retro_ogar_178, retro_ogar_181, retro_ogar_186, retro_ogar_262, retro_ogar_271, retro_ogar_29, retro_ogar_3,
Pongo abelii ENSPPYG00000025870 possible_ortholog 4 retrogenes
retro_pabe_106, retro_pabe_1635, retro_pabe_168, retro_pabe_895,
Sus scrofa ENSSSCG00000008170 ortholog_one2many 4 retrogenes
retro_sscr_1072, retro_sscr_1073, retro_sscr_128, retro_sscr_263,
Sus scrofa ENSSSCG00000025180 ortholog_one2many 6 retrogenes
retro_sscr_20, retro_sscr_34, retro_sscr_469, retro_sscr_501, retro_sscr_713, retro_sscr_81,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_65 52.88 82.40
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2. retro_pvam_197 69.05 98.40
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3. retro_pvam_349 73.02 100.00
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4. retro_pvam_410 68.93 82.40
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5. retro_pvam_441 60.16 96.80
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6. retro_pvam_469 54.03 98.40
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7. retro_pvam_484 67.77 95.20
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8. retro_pvam_501 71.05 91.20
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9. retro_pvam_565 75.40 100.00
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10. retro_pvam_606 73.15 84.00
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11. retro_pvam_631 73.55 96.00
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12. retro_pvam_815 59.32 92.00
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13. retro_pvam_861 57.89 74.40
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14. retro_pvam_864 70.59 92.80
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15. retro_pvam_1131 71.43 94.40
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16. retro_pvam_1265 67.97 100.00
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17. retro_pvam_1359 78.15 94.40
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Download FASTA sequences of all ENSPVAG00000011716 retrocopies