Parental gene:

ENSLAFG00000027873

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_27:3079459..3086254(+)


>ENSLAFG00000027873
ATGGCTCCCGCCAAGAAGGGTGGCGAGAAGAAGAAGGGTCGTTCTGCCATCAACGAAGTGGTGACCAGGGAGTACACCAT
CAACATTCACAAACGCATCCATGGCGTGGGTTTCAAGAAGCGTGCCCCTCGGGCACTCAAGGAGATCCGGAAATTTGCCA
TGAAGGAGATGGGAACCCCAGATGTGCGCATTGACACCAGGCTCAACAAAGCTGTCTGGGCCAAAGGCATAAGGAACGTC
CCATACCGAATCCGTGTACGGTTGTCCAGAAAACGTAACGAGGATGAAGACTCACCAAACAAGCTCTATACGTTGGTTAC
ATATGTACCTGTCACCACTTTCAAAAACCTACAGACAGTCAATGTGGATGAAAACTAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000007914 possible_ortholog 1 retrogene
Ailuropoda melanoleuca ENSAMEG00000015647 ortholog_one2one 2 retrogenes
Cavia porcellus ENSCPOG00000021031 ortholog_one2one 5 retrogenes
Equus caballus ENSECAG00000024079 ortholog_one2one 13 retrogenes
Latimeria chalumnae ENSLACG00000013603 ortholog_one2many 1 retrogene
Macropus eugenii ENSMEUG00000000963 ortholog_one2many 8 retrogenes
Myotis lucifugus ENSMLUG00000002507 possible_ortholog 21 retrogenes
Monodelphis domestica ENSMODG00000001704 possible_ortholog 5 retrogenes
Mustela putorius furo ENSMPUG00000012197 ortholog_one2one 2 retrogenes
Otolemur garnettii ENSOGAG00000014494 ortholog_one2many 10 retrogenes
Ochotona princeps ENSOPRG00000001204 ortholog_one2one 34 retrogenes
Pongo abelii ENSPPYG00000025870 ortholog_one2many 4 retrogenes
Pteropus vampyrus ENSPVAG00000011716 ortholog_one2one 17 retrogenes
Sarcophilus harrisii ENSSHAG00000011706 possible_ortholog 3 retrogenes
Sus scrofa ENSSSCG00000008170 ortholog_one2many 4 retrogenes
Sus scrofa ENSSSCG00000025180 ortholog_one2many 6 retrogenes
Tupaia belangeri ENSTBEG00000016254 ortholog_one2one 137 retrogenes
retro_tbel_1092, retro_tbel_1129, retro_tbel_115, retro_tbel_1176, retro_tbel_1195, retro_tbel_1226, retro_tbel_1239, retro_tbel_1249, retro_tbel_1254, retro_tbel_1258, retro_tbel_1266, retro_tbel_131, retro_tbel_1310, retro_tbel_1334, retro_tbel_1356, retro_tbel_1368, retro_tbel_1369, retro_tbel_1381, retro_tbel_1402, retro_tbel_1414, retro_tbel_1423, retro_tbel_1437, retro_tbel_1454, retro_tbel_1574, retro_tbel_1593, retro_tbel_1597, retro_tbel_1605, retro_tbel_1611, retro_tbel_1612, retro_tbel_1632, retro_tbel_1768, retro_tbel_1797, retro_tbel_1802, retro_tbel_184, retro_tbel_189, retro_tbel_1890, retro_tbel_1897, retro_tbel_1915, retro_tbel_2024, retro_tbel_2027, retro_tbel_2050, retro_tbel_2069, retro_tbel_2093, retro_tbel_2140, retro_tbel_2159, retro_tbel_2233, retro_tbel_2341, retro_tbel_2359, retro_tbel_2382, retro_tbel_246, retro_tbel_2520, retro_tbel_2531, retro_tbel_2581, retro_tbel_2582, retro_tbel_2614, retro_tbel_2625, retro_tbel_2668, retro_tbel_2692, retro_tbel_2709, retro_tbel_2741, retro_tbel_2789, retro_tbel_2825, retro_tbel_2847, retro_tbel_2930, retro_tbel_2951, retro_tbel_3015, retro_tbel_3028, retro_tbel_3035, retro_tbel_3061, retro_tbel_3077, retro_tbel_3154, retro_tbel_3174, retro_tbel_3222, retro_tbel_3274, retro_tbel_3282, retro_tbel_3292, retro_tbel_3346, retro_tbel_3365, retro_tbel_337, retro_tbel_3378, retro_tbel_3425, retro_tbel_3442, retro_tbel_3484, retro_tbel_3500, retro_tbel_3519, retro_tbel_3578, retro_tbel_3580, retro_tbel_3618, retro_tbel_3637, retro_tbel_3710, retro_tbel_3722, retro_tbel_3745, retro_tbel_3775, retro_tbel_3780, retro_tbel_3794, retro_tbel_3801, retro_tbel_381, retro_tbel_3812, retro_tbel_3846, retro_tbel_3869, retro_tbel_3873, retro_tbel_398, retro_tbel_3982, retro_tbel_3996, retro_tbel_4033, retro_tbel_4069, retro_tbel_4158, retro_tbel_4161, retro_tbel_4174, retro_tbel_4235, retro_tbel_4247, retro_tbel_4286, retro_tbel_4297, retro_tbel_4363, retro_tbel_4374, retro_tbel_461, retro_tbel_4612, retro_tbel_4646, retro_tbel_466, retro_tbel_488, retro_tbel_503, retro_tbel_510, retro_tbel_577, retro_tbel_599, retro_tbel_626, retro_tbel_696, retro_tbel_718, retro_tbel_741, retro_tbel_744, retro_tbel_780, retro_tbel_788, retro_tbel_872, retro_tbel_886, retro_tbel_891, retro_tbel_908, retro_tbel_914, retro_tbel_942,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_20 63.06 88.80
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2. retro_lafr_56 70.25 96.80
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3. retro_lafr_118 70.40 100.00
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4. retro_lafr_187 74.75 79.20
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5. retro_lafr_245 69.49 92.80
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6. retro_lafr_307 66.67 100.00
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7. retro_lafr_663 68.85 96.00
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8. retro_lafr_703 72.55 81.60
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9. retro_lafr_710 67.46 100.00
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10. retro_lafr_778 66.36 84.00
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11. retro_lafr_885 55.91 100.00
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12. retro_lafr_926 72.22 98.40
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Download FASTA sequences of all ENSLAFG00000027873 retrocopies