RetrogeneDB ID: | retro_lafr_885 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_44:14294725..14295095(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSLAFG00000027873 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 55.91 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MAPAKKGGEKKKGRSAINEVVTREYTINIHKRIHGV-GFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLN |
MAP.KK..E.K.G....N.V.TRE.TIN..K.IHGV.GF...A...L....KFA.KE.G......D.RL. | |
Retrocopy | MAPTKKNDEEK-GCPDVNKVATREHTINTPKPIHGV<GFNRCASWTLNGALKFATKEVGLLNMHNDIRLS |
Parental | KAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYT-LVTYVPVTTFKNLQTVNVDEN |
KAV.A.GIRN.P..I.V.LSR..NE.E..P...YT.LVTYVPVT.FKNLQ.V..DEN | |
Retrocopy | KAV*AEGIRNTPNHIHVQLSRRYNEHEAAPKNYYT<LVTYVPVTAFKNLQMVSEDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |