Parental gene:

HMGB2, ENSPVAG00000014656

Aliases:None
Description:high mobility group box 2 [Source:HGNC Symbol;Acc:5000]
Organism:Megabat (Pteropus vampyrus)
Coordinates:GeneScaffold_3162:910935..911762(-)


>ENSPVAG00000014656
ATGGGTAAAGGAGACCCCAACAAGCCCAGGGGCAAAATGTCCTCGTATGCCTTCTTCGTGCAAACCTGCCGGGAAGAGCA
CAAGAAGAAACACCCAGACTCTTCCGTCAATTTTGCCGAATTCTCCAAGAAATGTTCGGAGAGATGGAAGACCATGTCTG
CAAAGGAAAAGTCAAAGTTCGAAGACATGGCAAAAAGTGACAAAGCTCGCTATGACAGGGAGATGAAAAATTATGTTCCT
CCCAAAGGTGATAAGAAAGGAAAGAAAAAAGATCCCAATGCTCCTAAAAGGCCTCCATCTGCCTTCTTCCTGTTTTGCTC
TGAACATCGCCCAAAGATCAAAAGCGAACACCCTGGCTTATCCATTGGGGATACTGCAAAAAAGTTGGGTGAAATGTGGT
CTGAACAATCAGCCAAAGATAAGCAACCATATGAACAGAAGGCAGCTAAGCTAAAGGAGAAATATGAAAAG

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000015101 possible_ortholog 1 retrogene
retro_btau_58,
Dasypus novemcinctus ENSDNOG00000019440 ortholog_one2one 4 retrogenes
retro_dnov_1142, retro_dnov_1457, retro_dnov_454, retro_dnov_532,
Echinops telfairi ENSETEG00000010379 possible_ortholog 3 retrogenes
retro_etel_1474, retro_etel_1841, retro_etel_2023,
Echinops telfairi ENSETEG00000016379 possible_ortholog 1 retrogene
retro_etel_414,
Felis catus ENSFCAG00000004218 possible_ortholog 2 retrogenes
retro_fcat_279, retro_fcat_52,
Loxodonta africana ENSLAFG00000010417 possible_ortholog 3 retrogenes
retro_lafr_1096, retro_lafr_1142, retro_lafr_595,
Macropus eugenii ENSMEUG00000002256 ortholog_one2one 3 retrogenes
retro_meug_1920, retro_meug_1989, retro_meug_550,
Monodelphis domestica ENSMODG00000003527 ortholog_one2one 3 retrogenes
retro_mdom_1160, retro_mdom_1919, retro_mdom_69,
Oryctolagus cuniculus ENSOCUG00000000074 possible_ortholog 1 retrogene
retro_ocun_1829,
Pteropus vampyrus ENSPVAG00000000219 within_species_paralog 1 retrogene
retro_pvam_356,
Pteropus vampyrus ENSPVAG00000001431 other_paralog 6 retrogenes
retro_pvam_1156, retro_pvam_154, retro_pvam_429, retro_pvam_508, retro_pvam_774, retro_pvam_960,
Rattus norvegicus ENSRNOG00000013167 possible_ortholog 2 retrogenes
retro_rnor_173, retro_rnor_54,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_872 75.62 100.00
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Download FASTA sequences of all ENSPVAG00000014656 retrocopies