Parental gene:

Hmga1, ENSRNOG00000000488

Aliases:Hmga1, Hmgi, Hmgiy
Description:High mobility group protein HMG-I/HMG-Y [Source:UniProtKB/Swiss-Prot;Acc:Q8K585]
Organism:Rat (Rattus norvegicus)
Coordinates:20:9338363..9341350(+)


>ENSRNOG00000000488
ATGAGCGAGTCGGTCTCAAAGTCCAGCCAGCCCCTGGCCTCCAAGCAGGAAAAGGATGGGACTGAGAAGCGAGGCCGGGG
CAGGCCGCGCAAGCAGCCTTCGGTGAGTCCTGGGACGGCGCTGGTAGGGAGTCAGAAGGAGCCCAGTGAAGTGCCAACCC
CGAAGAGACCCCGGGGCCGGCCGAAGGGAAGCAAGAACAAGGGCACAGCCAAGACGCGGAAAGTTACCACAACTCCGGGG
AGGAAACCAAGGGGCAGACCCAAGAAACTGGAGAAGGAGGAAGAGGAGGGCATCTCCCAGGAGTCCTCGGAGGAGGAGCA
GTGA

Library Parental gene expression (RPM)
SRP017611_brain 15 .96 RPM
SRP017611_kidney 5 .16 RPM
SRP017611_liver 1 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001061 ortholog_one2many 1 retrogene
retro_amel_1637,
Callithrix jacchus ENSCJAG00000015226 ortholog_many2many 2 retrogenes
retro_cjac_1197, retro_cjac_3158,
Homo sapiens ENSG00000137309 ortholog_one2many 4 retrogenes
retro_hsap_1175, retro_hsap_2277, retro_hsap_4663, retro_hsap_695,
Myotis lucifugus ENSMLUG00000010085 ortholog_one2many 2 retrogenes
retro_mluc_1619, retro_mluc_2429,
Macaca mulatta ENSMMUG00000019529 ortholog_many2many 2 retrogenes
retro_mmul_1276, retro_mmul_2406,
Mus musculus ENSMUSG00000046711 ortholog_many2many 1 retrogene
retro_mmus_188,
Nomascus leucogenys ENSNLEG00000008303 ortholog_many2many 1 retrogene
retro_nleu_1097,
Procavia capensis ENSPCAG00000016076 ortholog_one2many 1 retrogene
retro_pcap_236,
Pongo abelii ENSPPYG00000029838 ortholog_many2many 4 retrogenes
retro_pabe_1941, retro_pabe_2441, retro_pabe_3623, retro_pabe_960,
Pan troglodytes ENSPTRG00000040884 ortholog_one2many 6 retrogenes
retro_ptro_1611, retro_ptro_2053, retro_ptro_3098, retro_ptro_499, retro_ptro_789, retro_ptro_807,
Pteropus vampyrus ENSPVAG00000014283 ortholog_one2many 1 retrogene
retro_pvam_116,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_164 88.71 57.94
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Download FASTA sequences of all ENSRNOG00000000488 retrocopies