Parental gene:

Lrrc57, ENSRNOG00000009143

Aliases:None
Description:leucine-rich repeat-containing protein 57 [Source:RefSeq peptide;Acc:NP_001012354]
Organism:Rat (Rattus norvegicus)
Coordinates:3:118912833..118918178(-)


>ENSRNOG00000009143
ATGGGAAACAGTGCCCTCCGTGCTCATGTGGAAACAGCGCAGAAAACTGGTGTCTTTCAGCTTAAAGACCGTGGTCTGAC
CGAGTTCCCCTCAGAGTTGCAGAAGCTGACAAGCAATCTTAGGACCATCGATTTGTCCAACAACAAGATCGACAGCCTAC
CACCTCTGATAATAGGAAAGTTCACTCTGCTAAAGAGTCTCTCTCTCAACAACAACAAACTGACTGTTCTACCTGATGAA
TTATGCAATCTGAAAAAACTAGAGACACTAAGTCTCAACAACAATCACCTGAGAGAGCTACCGTCTTCCTTCGGGCAGCT
GTCGGCTCTGAAGACCCTGAGCCTCTCTGGGAATCAGCTGGGAGCATTACCACCCCAGCTTTGTAGCTTGAGGCATCTGG
ATGTAGTAGATCTCTCCAAAAACCAGATTCGGAGTATACCTGACACAGTCGGGGAGCTGCAGGCCATCGAACTCAATCTC
AACCAGAACCAG

Library Parental gene expression (RPM)
SRP017611_liver 3 .43 RPM
SRP017611_kidney 10 .12 RPM
SRP017611_brain 17 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006482 ortholog_one2many 1 retrogene
retro_chof_2306,
Callithrix jacchus ENSCJAG00000002991 ortholog_one2many 1 retrogene
retro_cjac_2819,
Homo sapiens ENSG00000180979 ortholog_one2many 1 retrogene
retro_hsap_2163,
Gorilla gorilla ENSGGOG00000009597 ortholog_one2many 1 retrogene
retro_ggor_1718,
Loxodonta africana ENSLAFG00000005465 ortholog_one2many 2 retrogenes
retro_lafr_1027, retro_lafr_767,
Macaca mulatta ENSMMUG00000001544 ortholog_one2many 1 retrogene
retro_mmul_901,
Nomascus leucogenys ENSNLEG00000004485 ortholog_one2many 1 retrogene
retro_nleu_1812,
Otolemur garnettii ENSOGAG00000007751 ortholog_one2many 1 retrogene
retro_ogar_3437,
Pan troglodytes ENSPTRG00000006976 ortholog_one2many 2 retrogenes
retro_ptro_1649, retro_ptro_1650,
Rattus norvegicus ENSRNOG00000048310 within_species_paralog 1 retrogene
retro_rnor_1732,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_796 80.62 97.56
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Download FASTA sequences of all ENSRNOG00000009143 retrocopies