Parental gene: | Mthfd2, ENSRNOG00000010833 |
| Aliases: | None |
| Description: | bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial [Source:RefSeq peptide;Acc:NP_001102868] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 4:179592813..179604331(-) |
>ENSRNOG00000010833
ATGGTTTCTGTTTCCTTGTCTGCGCTGGCAGTGCGGTTGTTGCGCCCCACGCACGGCTGCCACTCCCGCCTACAGTCCTT
CCACCTGGCGGCAGTACGAAATGAAGCCGTGGTCATTTCTGGAAGGAAGCTGGCCCAGCAGATTAAGCAAGAAGTACGGC
AGGAGGTGGAAGAGTGGGTGGCCTCGGGCAACAAGCGGCCACACCTCAGTGTCATTCTGGTTGGCGACAATCCTGCCAGT
CACTCCTATGTTCTCAACAAAACCAGGGCAGCAGCTGAAGTGGGAATCAACAGTGAGACAATTGTGAAACCAGCCTCAGT
GTCAGAGGAAGAGCTGTTGAATTCAATCAGGACATTGAATGACGATGAGAATGTAGATGGCCTCCTTGTTCAGCTGCCAC
TCCCAGAGCACATTGACGAGAGAAAGATCTGCAATGCTGTTTCTCCTGACAAGGATGTTGATGGCTTTCATGTCATCAAC
GTTGGGCGCATGTGTTTGGACCAGTATTCCATGCTGCCAGCAACTCCATGGGGCGTGTGGGAGATACTCAAGCGAACAGG
CATTCCAACCTTAGGGAAGAATGTGGTAGTGGCTGGCAGGTCCAAAAACGTTGGGATGCCAATTGCAATGCTGCTGCACA
CGGATGGGGCACACGAGCGGCCTGGGGGTGATGCCACAGTCACAATATCTCATCGGCACACTCCCAAAGAACAGCTGAAG
AAGCACACGATCCTTGCGGACATTGTGATATCTGCTGCTGGCATTCCAAACCTCATCACAGCTGACATGATCAAGGAAGG
AGCAACAGTCATCGACGTGGGGATAAACAGAGTTCAAGATCCTGTCACCGCAAAGCCCAAGTTGGTTGGAGATGTGGATT
TTGAAGGAGTCAAGAAGAAAGCTGGTTACATCACTCCTGTCCCTGGGGGTGTTGGTCCCATGACAGTGGCCATGCTCATG
AAGAACACCATTATTGCTGCAAAGAAAGTGCTCAGGCCAGAGGAGCTGGAAGTGTTGAAGTCCACACAGCGCGGAGTTGC
CACCAACTAG
ATGGTTTCTGTTTCCTTGTCTGCGCTGGCAGTGCGGTTGTTGCGCCCCACGCACGGCTGCCACTCCCGCCTACAGTCCTT
CCACCTGGCGGCAGTACGAAATGAAGCCGTGGTCATTTCTGGAAGGAAGCTGGCCCAGCAGATTAAGCAAGAAGTACGGC
AGGAGGTGGAAGAGTGGGTGGCCTCGGGCAACAAGCGGCCACACCTCAGTGTCATTCTGGTTGGCGACAATCCTGCCAGT
CACTCCTATGTTCTCAACAAAACCAGGGCAGCAGCTGAAGTGGGAATCAACAGTGAGACAATTGTGAAACCAGCCTCAGT
GTCAGAGGAAGAGCTGTTGAATTCAATCAGGACATTGAATGACGATGAGAATGTAGATGGCCTCCTTGTTCAGCTGCCAC
TCCCAGAGCACATTGACGAGAGAAAGATCTGCAATGCTGTTTCTCCTGACAAGGATGTTGATGGCTTTCATGTCATCAAC
GTTGGGCGCATGTGTTTGGACCAGTATTCCATGCTGCCAGCAACTCCATGGGGCGTGTGGGAGATACTCAAGCGAACAGG
CATTCCAACCTTAGGGAAGAATGTGGTAGTGGCTGGCAGGTCCAAAAACGTTGGGATGCCAATTGCAATGCTGCTGCACA
CGGATGGGGCACACGAGCGGCCTGGGGGTGATGCCACAGTCACAATATCTCATCGGCACACTCCCAAAGAACAGCTGAAG
AAGCACACGATCCTTGCGGACATTGTGATATCTGCTGCTGGCATTCCAAACCTCATCACAGCTGACATGATCAAGGAAGG
AGCAACAGTCATCGACGTGGGGATAAACAGAGTTCAAGATCCTGTCACCGCAAAGCCCAAGTTGGTTGGAGATGTGGATT
TTGAAGGAGTCAAGAAGAAAGCTGGTTACATCACTCCTGTCCCTGGGGGTGTTGGTCCCATGACAGTGGCCATGCTCATG
AAGAACACCATTATTGCTGCAAAGAAAGTGCTCAGGCCAGAGGAGCTGGAAGTGTTGAAGTCCACACAGCGCGGAGTTGC
CACCAACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 0 .34 RPM |
| SRP017611_kidney | 1 .88 RPM |
| SRP017611_brain | 3 .45 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017345 | possible_ortholog | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000008716 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000017810 | possible_ortholog | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000013987 | ortholog_one2one | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000012283 | possible_ortholog | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2170 | 93.77 | 73.64 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000010833 retrocopies