Parental gene:

JTB, ENSSSCG00000006559

Aliases:None
Description:Sus scrofa jumping translocation breakpoint (JTB), mRNA. [Source:RefSeq mRNA;Acc:NM_001128468]
Organism:Pig (Sus scrofa)
Coordinates:4:104615008..104617469(+)


>ENSSSCG00000006559
ATGCCTGCGGGCGCGGGGAGGCGTGGCCTCCCCCAGGGCCACCACCTCTGCTGGTTGCTCTGCGCTTTCACTTTAAAGCT
CTGCCAAGCAGAAGCTCCCGTGCGCGAGGAGAAACTTTCAGTGAGCACCTCAAATTTGCGGTGCTGGCTGGTGGAAGAGT
TTGTGGTGGCAGAAGAGTGTGCTCCATGTTCTAATTTCCAGGCTAAAACTACCCCTGAGTGCAGTTCCACAGGGTATGTG
GAGAAAATCACATGCAGCTCATCTAAGAGGAATGAGTTCAAGAGCTGCCGCTCAGCTCTGATGGAACAACACTTATTCTG
GAAATTCGAAGGGGCTGTTGTAGGTGTGGCCTTGGTCTTTGCTTGCCTGGTCATCGTGCGTCAGCGACAACTGGACAGAA
AGGCTCTGGAAAAGGTCCGGAAGCAAATTGAGTCCATATAA

Library Parental gene expression (RPM)
SRP014902_placenta 10 .62 RPM
SRP014902_testis 52 .48 RPM
SRP018288_heart 22 .40 RPM
SRP018288_kidney 26 .70 RPM
SRP018288_liver 20 .95 RPM
SRP018288_lung 16 .70 RPM
SRP018856_adipose 32 .94 RPM
SRP035408_brain 15 .44 RPM
SRP035408_liver 17 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000002520 ortholog_one2one 1 retrogene
retro_chof_1297,
Callithrix jacchus ENSCJAG00000009973 ortholog_one2one 1 retrogene
retro_cjac_496,
Dasypus novemcinctus ENSDNOG00000000740 ortholog_one2many 1 retrogene
retro_dnov_1095,
Echinops telfairi ENSETEG00000008256 ortholog_one2one 1 retrogene
retro_etel_1340,
Felis catus ENSFCAG00000012590 ortholog_one2one 2 retrogenes
retro_fcat_1025, retro_fcat_1838,
Myotis lucifugus ENSMLUG00000013299 ortholog_one2one 1 retrogene
retro_mluc_2225,
Oryctolagus cuniculus ENSOCUG00000011788 ortholog_one2one 1 retrogene
retro_ocun_470,
Procavia capensis ENSPCAG00000003210 ortholog_one2one 1 retrogene
retro_pcap_301,
Pongo abelii ENSPPYG00000000791 ortholog_one2one 1 retrogene
retro_pabe_1886,
Tupaia belangeri ENSTBEG00000012646 ortholog_one2one 1 retrogene
retro_tbel_762,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_687 85.95 80.82
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Download FASTA sequences of all ENSSSCG00000006559 retrocopies