Parental gene:

SSR4, ENSSSCG00000012784

Aliases:None
Description:signal sequence receptor, delta [Source:HGNC Symbol;Acc:11326]
Organism:Pig (Sus scrofa)
Coordinates:X:142101856..142106233(+)


>ENSSSCG00000012784
ATGGCGGCGCTGGCATCTCTCGGCGCCCTGGCGCTACTCCTGCTGTCCGGCCTCTCCTGCTGCTCAGCAGAGGCCTGTGT
GGAGCCCCAGATCACGCCCTCGTACTATACCACGTCGGACGCCGTCATCTCCACAGAGACCGTGTTCATCGTGGAACTCT
CCGTGACGTGCAAGAACAGGGTCCAGAACATGGCTCTTTATGCTGACGTCAGTGGTAAACAGTTTCCTGTCACCCGGGGC
CAAGACGTGGGGCGTTATCAGGTGTCCTGGAGCCTGGACCACAAGAGCGCACATGCGGGCACCTACGAGGTCAGGTTCTT
CGATGAGGAGTCCTACAGCCTCCTGAGGAAGGCTCAGAGAAATAACGAGGACGTTTCCGTCATCCCGCCTCTGTTCACAG
TCAGCGTGGACCATCGGGGCACTTGGAACGGGCCCTGGGTCTCCACAGAGGTCCTGGCCGCAGCCATTGGCCTGGTGATC
TACTACCTGGCCTTCAGTGCCAAGAGCCACATCCAGGCCTGA

Library Parental gene expression (RPM)
SRP014902_placenta 104 .46 RPM
SRP014902_testis 251 .77 RPM
SRP018288_heart 33 .66 RPM
SRP018288_kidney 70 .73 RPM
SRP018288_liver 107 .94 RPM
SRP018288_lung 160 .38 RPM
SRP018856_adipose 78 .46 RPM
SRP035408_brain 36 .43 RPM
SRP035408_liver 98 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000011328 ortholog_one2one 1 retrogene
retro_acar_97,
Callithrix jacchus ENSCJAG00000011167 ortholog_one2one 1 retrogene
retro_cjac_2056,
Dasypus novemcinctus ENSDNOG00000025714 ortholog_one2one 2 retrogenes
retro_dnov_1204, retro_dnov_922,
Homo sapiens ENSG00000180879 ortholog_one2one 1 retrogene
retro_hsap_2536,
Gorilla gorilla ENSGGOG00000024329 ortholog_one2one 1 retrogene
retro_ggor_1585,
Loxodonta africana ENSLAFG00000006908 ortholog_one2one 1 retrogene
retro_lafr_337,
Mustela putorius furo ENSMPUG00000008803 ortholog_one2many 1 retrogene
retro_mputfur_148,
Nomascus leucogenys ENSNLEG00000013602 ortholog_one2one 1 retrogene
retro_nleu_2738,
Otolemur garnettii ENSOGAG00000006738 ortholog_one2one 1 retrogene
retro_ogar_691,
Procavia capensis ENSPCAG00000009037 ortholog_one2one 1 retrogene
retro_pcap_139,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_866 63.77 82.82
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Download FASTA sequences of all ENSSSCG00000012784 retrocopies