Parental gene:

FBL, ENSSSCG00000030510

Aliases:None
Description:fibrillarin [Source:HGNC Symbol;Acc:3599]
Organism:Pig (Sus scrofa)
Coordinates:6:44160340..44172057(+)


>ENSSSCG00000030510
CGCGCGCCTGCGCTCCTTTCCACGTGCGTAAACCCGGGACGCGTGGAGTCGAAAGAGCCTCAGATTACTGAGCCCAGCTC
TAATTTAGTGAAATCATCACCTGGTTTCAGCCCCCGAGGGGGCGGCTTCGGTGGCCGAGGGGGCTTTGGTGACCGTGGCG
GTCGAGGCGGAGGCCGAGGGGGCTTCGGCGGAGGCCGAGGAGGCTTCGGCGGAGGCCGAGGCCGCGGCGGGGGCTTTCGG
GGCCGAGGCCGAGGCGGCGGCGGCGGCGGAAGAGGTGGTGGGTTCCAGTCCGGGGGCAGCCGGGGTCGTGGTCGGGGAGG
AAAAAAAGGAAACCAGTCGGGGAAGAATGTGATGGTGGAGCCCCATCGGCATGAGGGCGTCTTCATCTGCCGGGGAAAGG
AAGATGCCCTGGTCACCAAGAATCTGGTCCCTGGAGAATCTGTTTATGGAGAGAAGAGAGTTTCGATTTCGGAGGGAGAT
GACAAAATCGAGTACCGTGCCTGGAACCCCTTCCGTTCTAAGCTGGCGGCAGCGATCCTGGGCGGTGTAGACCAGATCCA
CATCAAGCCGGGGGCCAAGGTGCTCTACCTGGGGGCTGCCTCAGGCACCACCGTCTCCCACGTCTCTGACATCGTGGGCC
CGGACGGTCTGGTCTATGCAGTTGAGTTCTCCCACCGTTCCGGCCGTGACCTCATTAACCTGGCCAAGAAGAGGACCAAC
ATCATTCCCGTCATCGAAGATGCTCGGCACCCGCACAAATACCGCATGCTCATCGCGATGGTGGATGTGATCTTTGCTGA
CGTGGCCCAGCCAGACCAGACTCGGATTGTAGCCCTGAATGCTCACACCTTCCTACGCAATGGAGGACACTTTGTGATCT
CCATTAAGGCCAACTGCATTGACTCCACAGCCTCTGCTGAGGCCGTGTTTGCCTCTGAAGTGAAAAAGATGCAGCAGGAG
AACATGAAGCCCCAGGAGCAGCTGACCCTAGAGCCGTACGAAAGAGACCACGCTGTGGTCGTGGGTGTGTACAGACCACC
CCCCAAGGTGAAGAACTGA

Library Parental gene expression (RPM)
SRP014902_placenta 50 .97 RPM
SRP014902_testis 90 .53 RPM
SRP018856_adipose 52 .68 RPM
SRP018288_kidney 27 .88 RPM
SRP018288_lung 35 .13 RPM
SRP018288_liver 35 .66 RPM
SRP018288_heart 19 .17 RPM
SRP035408_liver 45 .50 RPM
SRP035408_brain 50 .94 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002579 ortholog_one2one 1 retrogene
retro_btau_108,
Canis familiaris ENSCAFG00000005412 ortholog_one2one 1 retrogene
retro_cfam_1697,
Homo sapiens ENSG00000105202 ortholog_one2one 1 retrogene
retro_hsap_99,
Macropus eugenii ENSMEUG00000014684 ortholog_one2many 1 retrogene
retro_meug_1077,
Microcebus murinus ENSMICG00000007686 ortholog_one2one 1 retrogene
retro_mmur_1127,
Mus musculus ENSMUSG00000046865 ortholog_one2one 4 retrogenes
retro_mmus_1141, retro_mmus_1585, retro_mmus_1609, retro_mmus_89,
Nomascus leucogenys ENSNLEG00000014234 ortholog_one2one 1 retrogene
retro_nleu_1947,
Otolemur garnettii ENSOGAG00000006463 ortholog_one2one 2 retrogenes
retro_ogar_3102, retro_ogar_504,
Pan troglodytes ENSPTRG00000010982 ortholog_one2one 2 retrogenes
retro_ptro_2208, retro_ptro_3074,
Pteropus vampyrus ENSPVAG00000010849 ortholog_one2one 1 retrogene
retro_pvam_231,
Rattus norvegicus ENSRNOG00000019229 ortholog_one2many 4 retrogenes
retro_rnor_1082, retro_rnor_1780, retro_rnor_643, retro_rnor_75,
Tupaia belangeri ENSTBEG00000007755 ortholog_one2one 2 retrogenes
retro_tbel_3774, retro_tbel_3974,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_39 77.49 88.07
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Download FASTA sequences of all ENSSSCG00000030510 retrocopies