Parental gene: | ENSSTOG00000000642 |
| Aliases: | None |
| Description: | None |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393534.1:2034861..2049420(-) |
>ENSSTOG00000000642
GTATTGCTGCAGGGTGACAGCAATGATGACACTGAAGATGTTTCATTGTTTGATGCAGAAGAAGAGACAACTAATAGACC
AAGAAAATCCAAAATCCGACATCCAGTGGCATCATTTTTCCATTTGTTCTTCCGAGTCAGTGCCATTATAGTCTATCTTC
TCTGTGAATTGCTCAGCAGCAGCTTTATTGCCTGTATGGTGACAATTATCTTGTTGTTGTCATGTGACTTTTGGGCAGTG
AAGAATGTCACAGGTAGACTGATGGTAGGCCTTCGGTGGTGGAATCATATTGATGAGGATGGAAAGAGTCATTGGGTGTT
TGAGTCCAGGAAGGCATCTCCTCAGGAGAATAAAACTGTTTCAGAAGCTGAATCAAGAATCTTTTGGTTAGGACTAATTG
CCTGTCCAATACTGTGGGTGATATTTGCCTTTAGTGCTCTCTTCTCCTTCAGAGTAAAATGGTTGGCTGTGGTTATCATG
GGTGTGGTACTACAGGGTGCCAACCTGTATGGTTATATCAGGTGCAAAGTGGGCAGCCGGAAGAATTTAACCAGCATGGC
TACCTCGTATCTTGGAAAGCAGTTTTTAAAACAAACATGCACAAGTGAAAACCAAATTCAAGCT
GTATTGCTGCAGGGTGACAGCAATGATGACACTGAAGATGTTTCATTGTTTGATGCAGAAGAAGAGACAACTAATAGACC
AAGAAAATCCAAAATCCGACATCCAGTGGCATCATTTTTCCATTTGTTCTTCCGAGTCAGTGCCATTATAGTCTATCTTC
TCTGTGAATTGCTCAGCAGCAGCTTTATTGCCTGTATGGTGACAATTATCTTGTTGTTGTCATGTGACTTTTGGGCAGTG
AAGAATGTCACAGGTAGACTGATGGTAGGCCTTCGGTGGTGGAATCATATTGATGAGGATGGAAAGAGTCATTGGGTGTT
TGAGTCCAGGAAGGCATCTCCTCAGGAGAATAAAACTGTTTCAGAAGCTGAATCAAGAATCTTTTGGTTAGGACTAATTG
CCTGTCCAATACTGTGGGTGATATTTGCCTTTAGTGCTCTCTTCTCCTTCAGAGTAAAATGGTTGGCTGTGGTTATCATG
GGTGTGGTACTACAGGGTGCCAACCTGTATGGTTATATCAGGTGCAAAGTGGGCAGCCGGAAGAATTTAACCAGCATGGC
TACCTCGTATCTTGGAAAGCAGTTTTTAAAACAAACATGCACAAGTGAAAACCAAATTCAAGCT
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000005330 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000007609 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000171928 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000175106 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000003854 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000002825 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000019203 | ortholog_one2many | 5 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000014658 | ortholog_one2many | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000000498 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000012225 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000007790 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000008796 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000050649 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000008082 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_310 | 91.49 | 89.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_473 | 78.15 | 57.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_itri_711 | 84.39 | 98.08 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_itri_782 | 85.31 | 85.10 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_itri_1415 | 88.06 | 95.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_itri_1841 | 86.67 | 56.73 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000000642 retrocopies