Parental gene: | ENSSTOG00000016395 |
| Aliases: | None |
| Description: | None |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393280.1:42628886..42641620(+) |
>ENSSTOG00000016395
ATGAACCCCAGCGCCCCCAGCTACCCCATGGCCTCGCTCTACGTGGGGGACCTACACCCCGACGTGACCGAGGCGATGCT
CTACGAGAAGTTCAGCCCGGCCGGGCCCATCCTCTCCATCCGGGTCTGCAGGGACATGATCACCCGCCGCTCCTTGGGCT
ACGCGTATGTGAACTTCCAGCAGCCGGCGGACGCGGAGCGTGCTTTGGACACCATGAATTTTGATGTTATAAAGGGCAAG
CCAGTACGCATCATGTGGTCTCAGCGCGATCCATCGCTTCGCAAAAGTGGAGTAGGCAACATATTCATTAAAAATTTGGA
CAAATCCATTGATAATAAAGCACTGTATGATACATTTTCTGCTTTTGGTAACATCCTTTCATGTAAGGTGGTTTGTGATG
AAAATGGTTCCAAGGGCTATGGATTTGTACATTTTGAGACACAGGAAGCAGCCGAAAGAGCTATTGAAAAAATGAATGGA
ATGCTTCTAAATGATCGCAAAGTATTTGTTGGACGATTTAAATCTCGTAAAGAACGAGAAGCAGAACTTGGAGCTAGGGC
AAAAGAGTTCACCAATGTTTACATCAAGAATTTTGGAGAAGACATGGATGATGAGCGCCTTAAGGATCTCTTTGGCAAGT
TTGGACCTGCCTTAAGTGTGAAAGTAATGACTGATGAAAGTGGAAAATCCAAAGGATTTGGATTTGTAAGCTTTGAAAGG
CATGAAGATGCACAGAAAGCTGTGGATGAAATGAATGGAAAGGAGCTCAACGGAAAACAAATTTATGTTGGTCGAGCTCA
GAAAAAAGTGGAACGGCAGACGGAACTAAAGCGAAAATTTGAACAGATGAAGCAAGATAGGATCACCAGATACCAGGGAC
GAGGAATCCTATTTTACGGTGTTAACCTTTATGTGAAAAACCTTGATGATGGTATTGATGATGAACGTCTCCGGAAAGAG
TTTTCTCCATTTGGTACAATCACTAGTGCAAAGGTTATGATGGAGGGTGGTCGCAGCAAAGGGTTTGGTTTTGTATGTTT
CTCCTCCCCAGAAGAAGCCACAAAAGCAGTTACAGAAATGAATGGTAGAATTGTGGCCACCAAGCCACTGTATGTAGCTT
TAGCTCAGCGCAAAGAAGAGCGCCAGGCTCACCTCACTAACCAGTATATGCAGAGAATGGCAAGTGTACGAGCTGTGCCC
AACCCTGTAATCAACCCCTACCAGCCAGCACCTCCTTCAGGTTACTTCATGGCAGCTATCCCACAGACTCAGAACCGTGC
TGCATACTATCCTCCTAGCCAAATTGCTCAACTAAGACCAAGTCCTCGCTGGACTGCTCAGGGTGCCAGACCTCATCCAT
TCCAAAATATGCCCGGTGCTATCCGCCCAGCTGCTCCTAGACCACCATTTAGTACTATGAGACCAGCTTCTTCACAAGTT
CCACGAGTCATGTCAACACAGCCTAACACATCAACACAGACAATGGGTCCACGTCCTGCAGCTGCTGCTGCTGCAGCTAC
CCCTGCTGTCCGCACCGTTCCACAGTATAAATATGCTGCGGGAGTCCGCAATCCTCAGCAACATCTTAATGCACAGCCAC
AAGTTACCATGCAACAGCCTGCTGTTCATGTACAAGGTCAGGAACCTTTGACTGCTTCCATGTTGGCATCTGCCCCCCCT
CAAGAGCAAAAGCAAATGTTGGGTGAACGGCTGTTTCCTCTTATTCAAGCCATGCACCCTACTCTTGCTGGTAAAATCAC
TGGCATGTTATTGGAGATTGATAATTCAGAACTTCTTCATATGCTTGAGTCTCCAGAGTCTCTCCGTTCTAAG
ATGAACCCCAGCGCCCCCAGCTACCCCATGGCCTCGCTCTACGTGGGGGACCTACACCCCGACGTGACCGAGGCGATGCT
CTACGAGAAGTTCAGCCCGGCCGGGCCCATCCTCTCCATCCGGGTCTGCAGGGACATGATCACCCGCCGCTCCTTGGGCT
ACGCGTATGTGAACTTCCAGCAGCCGGCGGACGCGGAGCGTGCTTTGGACACCATGAATTTTGATGTTATAAAGGGCAAG
CCAGTACGCATCATGTGGTCTCAGCGCGATCCATCGCTTCGCAAAAGTGGAGTAGGCAACATATTCATTAAAAATTTGGA
CAAATCCATTGATAATAAAGCACTGTATGATACATTTTCTGCTTTTGGTAACATCCTTTCATGTAAGGTGGTTTGTGATG
AAAATGGTTCCAAGGGCTATGGATTTGTACATTTTGAGACACAGGAAGCAGCCGAAAGAGCTATTGAAAAAATGAATGGA
ATGCTTCTAAATGATCGCAAAGTATTTGTTGGACGATTTAAATCTCGTAAAGAACGAGAAGCAGAACTTGGAGCTAGGGC
AAAAGAGTTCACCAATGTTTACATCAAGAATTTTGGAGAAGACATGGATGATGAGCGCCTTAAGGATCTCTTTGGCAAGT
TTGGACCTGCCTTAAGTGTGAAAGTAATGACTGATGAAAGTGGAAAATCCAAAGGATTTGGATTTGTAAGCTTTGAAAGG
CATGAAGATGCACAGAAAGCTGTGGATGAAATGAATGGAAAGGAGCTCAACGGAAAACAAATTTATGTTGGTCGAGCTCA
GAAAAAAGTGGAACGGCAGACGGAACTAAAGCGAAAATTTGAACAGATGAAGCAAGATAGGATCACCAGATACCAGGGAC
GAGGAATCCTATTTTACGGTGTTAACCTTTATGTGAAAAACCTTGATGATGGTATTGATGATGAACGTCTCCGGAAAGAG
TTTTCTCCATTTGGTACAATCACTAGTGCAAAGGTTATGATGGAGGGTGGTCGCAGCAAAGGGTTTGGTTTTGTATGTTT
CTCCTCCCCAGAAGAAGCCACAAAAGCAGTTACAGAAATGAATGGTAGAATTGTGGCCACCAAGCCACTGTATGTAGCTT
TAGCTCAGCGCAAAGAAGAGCGCCAGGCTCACCTCACTAACCAGTATATGCAGAGAATGGCAAGTGTACGAGCTGTGCCC
AACCCTGTAATCAACCCCTACCAGCCAGCACCTCCTTCAGGTTACTTCATGGCAGCTATCCCACAGACTCAGAACCGTGC
TGCATACTATCCTCCTAGCCAAATTGCTCAACTAAGACCAAGTCCTCGCTGGACTGCTCAGGGTGCCAGACCTCATCCAT
TCCAAAATATGCCCGGTGCTATCCGCCCAGCTGCTCCTAGACCACCATTTAGTACTATGAGACCAGCTTCTTCACAAGTT
CCACGAGTCATGTCAACACAGCCTAACACATCAACACAGACAATGGGTCCACGTCCTGCAGCTGCTGCTGCTGCAGCTAC
CCCTGCTGTCCGCACCGTTCCACAGTATAAATATGCTGCGGGAGTCCGCAATCCTCAGCAACATCTTAATGCACAGCCAC
AAGTTACCATGCAACAGCCTGCTGTTCATGTACAAGGTCAGGAACCTTTGACTGCTTCCATGTTGGCATCTGCCCCCCCT
CAAGAGCAAAAGCAAATGTTGGGTGAACGGCTGTTTCCTCTTATTCAAGCCATGCACCCTACTCTTGCTGGTAAAATCAC
TGGCATGTTATTGGAGATTGATAATTCAGAACTTCTTCATATGCTTGAGTCTCCAGAGTCTCTCCGTTCTAAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000015833 | possible_ortholog | 5 retrogenes | |
| Homo sapiens | ENSG00000070756 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017786 | possible_ortholog | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000006222 | ortholog_one2many | 4 retrogenes | |
| Mus musculus | ENSMUSG00000022283 | possible_ortholog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000004354 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018790 | ortholog_one2many | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000008639 | possible_ortholog | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000011267 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_48 | 71.43 | 59.80 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_139 | 65.75 | 59.97 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000016395 retrocopies