Parental gene: | SKA2, ENSSTOG00000024169 |
| Aliases: | None |
| Description: | spindle and kinetochore associated complex subunit 2 [Source:HGNC Symbol;Acc:28006] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393300.1:4119100..4156304(+) |
>ENSSTOG00000024169
ATGGAGGCGGAGGTCGATAAGCTCGAACTGATGTTCCAGAAAGCTGACTCTGATCTGGATTACATTCAGTATAGGCTGGA
ATATGAAATCAAGAGAAATCATCCTGATTCAGCAGGCCAGAAAAATCCAGTTTCTGTCCTAAAGGAATTATCAGCGATGA
AGTCTCGCTATCAATCTTTATATGCACGTTTTAAACCAGTTGTTGTTGAGCAGAAAGAGACTAAGAGCCGAATTTATGCT
ACTTTGAATAAGACTATGACCATGATAGAAGAACTACAAAAGCAAACAGATCTGGAGCTGTCACCACTGACTGAAGAAGA
GAAAACTGTGACAGAGCAATTAAAATCTCACATAACAGACTCATGA
ATGGAGGCGGAGGTCGATAAGCTCGAACTGATGTTCCAGAAAGCTGACTCTGATCTGGATTACATTCAGTATAGGCTGGA
ATATGAAATCAAGAGAAATCATCCTGATTCAGCAGGCCAGAAAAATCCAGTTTCTGTCCTAAAGGAATTATCAGCGATGA
AGTCTCGCTATCAATCTTTATATGCACGTTTTAAACCAGTTGTTGTTGAGCAGAAAGAGACTAAGAGCCGAATTTATGCT
ACTTTGAATAAGACTATGACCATGATAGAAGAACTACAAAAGCAAACAGATCTGGAGCTGTCACCACTGACTGAAGAAGA
GAAAACTGTGACAGAGCAATTAAAATCTCACATAACAGACTCATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000021680 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000029233 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000006051 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000010768 | ortholog_one2one | 2 retrogenes | |
| Equus caballus | ENSECAG00000015007 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000022802 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000182628 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000003405 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000010942 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000014619 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000015241 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000020492 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000026072 | ortholog_one2one | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000025981 | ortholog_one2many | 3 retrogenes | |
| Sorex araneus | ENSSARG00000011128 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000006158 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000017196 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_725 | 86.49 | 90.91 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_1115 | 73.55 | 99.17 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_itri_1275 | 86.96 | 90.91 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_itri_1434 | 65.55 | 97.52 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000024169 retrocopies