Parental gene:

RNF5, ENSSTOG00000024478

Aliases:None
Description:ring finger protein 5, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:10068]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393537.1:1422596..1424670(-)


>ENSSTOG00000024478
ATGGCAGCAGCAGAAGAGGAGGACGGGGGCCCCGAAGGGCCAAACCGCGATCGGGGCGGGGCGGGCGCGACCTTCGAATG
TAATATATGTTTGGAGACCGCTCGGGAAGCTGTGGTCAGTGTGTGTGGCCACCTGTACTGTTGGCCCTGTCTTCATCAGT
GGCTGGAGACACGGCCAGAGCGGCAAGAGTGCCCAGTGTGTAAAGCTGGTATCAGCAGAGAGAAGGTTGTCCCGCTTTAT
GGGCGAGGGAGCCAGAAGCCCCAGGATCCCAGATTGAAAACTCCACCCCGCCCCCAGGGCCAGCGACCAGCTCCAGAGAG
CAGAGGGGGATTCCAGCCATTTGGAGATACCGGGGGTTTTCACTTCTCATTTGGTGTTGGTGCTTTTCCCTTTGGCTTTT
TCACCACTGTCTTCAATGCTCATGAGCCTTTCCGCAGGGGTGCAGGTGTGGATCTGGGACAGGGTCACCCGGCCTCCAGC
TGGCAGGATTCCCTCTTCCTGTTTCTCGCCATTTTCTTCTTTTTCTGGCTGCTCAGTATTTGA

Species Parental gene accession Homology type Retrogenes number
Oryctolagus cuniculus ENSOCUG00000016417 ortholog_one2one 1 retrogene
retro_ocun_1241,
Otolemur garnettii ENSOGAG00000031466 ortholog_one2one 1 retrogene
retro_ogar_1951,
Oreochromis niloticus ENSONIG00000013523 ortholog_one2one 1 retrogene
retro_onil_48,
Ochotona princeps ENSOPRG00000004366 ortholog_one2one 2 retrogenes
retro_opri_166, retro_opri_667,
Pan troglodytes ENSPTRG00000018010 ortholog_one2one 1 retrogene
retro_ptro_2740,
Tupaia belangeri ENSTBEG00000016320 ortholog_one2one 1 retrogene
retro_tbel_2183,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_480 76.97 83.89
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Download FASTA sequences of all ENSSTOG00000024478 retrocopies