Parental gene:

EEF1A2, ENSSTOG00000028862

Aliases:None
Description:eukaryotic translation elongation factor 1 alpha 2 [Source:HGNC Symbol;Acc:3192]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393324.1:10799031..10806215(-)


>ENSSTOG00000028862
TCTCCCCCGTGGCAGCAGGGCAAAATGGGCAAGGAGAAGACGCACATCAACATCGTGGTCATTGGCCATGTGGACTCAGG
CAAGTCCACCACAACAGGCCACCTCATCTACAAGTGCGGGGGCATTGACAAGAGGACCATTGAGAAGTTTGAGAAGGAGG
CTGCTGAGATGGGCAAGGGCTCCTTCAAGTATGCCTGGGTGCTGGACAAGTTGAAGGCAGAACGGGAGCGCGGCATCACC
ATCGACATCTCGCTCTGGAAGTTTGAGACCACTAAATACTACATCACCATCATCGACGCCCCGGGCCATCGCGACTTCAT
CAAAAACATGATCACTGGCACCTCCCAGGCGGACTGCGCGGTGCTGATCGTGGCTGCAGGTGTGGGCGAATTTGAGGCGG
GCATCTCCAAGAACGGGCAGACCCGAGAGCACGCGCTGCTGGCCTACACCCTGGGGGTGAAGCAGCTCATTGTGGGCGTC
AACAAGATGGACTCCACGGAGCCCGCCTATAGCGAGAAGCGCTACGACGAGATTGTTAAGGAGGTCAGCGCCTACATCAA
GAAGATCGGCTATAACCCAGCCACGGTGCCCTTCGTACCCATCTCTGGCTGGCATGGAGACAACATGCTGGAGCCTTCAC
CCAACATGCCGTGGTTCAAGGGCTGGAAAGTGGAGCGCAAGGAGGGGAACGCAAGCGGCGTGTCCCTGCTCGAGGCCCTG
GACACCATCCTGCCCCCCACACGCCCCACGGACAAGCCCCTGCGCCTGCCTCTGCAGGACGTGTACAAGATTGGCGGCAT
TGGCACTGTGCCCGTGGGCCGAGTGGAGACGGGCATCCTTCGGCCGGGCATGGTGGTGACCTTCGCACCAGTGAACATCA
CCACGGAGGTGAAGTCGGTGGAGATGCACCATGAGGCGCTTAGCGAGGCCCTGCCTGGTGACAATGTCGGCTTCAATGTG
AAGAATGTGTCTGTCAAGGACATCCGCCGTGGCAATGTGTGCGGGGACAGCAAGTCTGACCCCCCTCAGGAGGCTGCACA
GTTCACCTCTCAGGTCATCATCCTGAACCATCCAGGGCAGATCAGCGCCGGCTACTCGCCGGTCATTGACTGCCACACAG
CGCATATCGCCTGCAAGTTTGCCGAGCTGAAGGAAAAGATTGACCGTCGTTCTGGCAAAAAGCTGGAGGACAATCCCAAG
TCCCTCAAGTCCGGCGATGCAGCCATTGTGGAGATGGTGCCTGGGAAGCCCATGTGTGTGGAGAGCTTCTCGCAGTACCC
ACCTCTAGGT

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013249 possible_ortholog 1 retrogene
retro_cfam_1007,
Equus caballus ENSECAG00000022260 possible_ortholog 1 retrogene
retro_ecab_802,
Latimeria chalumnae ENSLACG00000002952 possible_ortholog 1 retrogene
retro_lcha_39,
Loxodonta africana ENSLAFG00000028081 possible_ortholog 1 retrogene
retro_lafr_651,
Macropus eugenii ENSMEUG00000005018 ortholog_one2one 23 retrogenes
retro_meug_1067, retro_meug_110, retro_meug_1160, retro_meug_1240, retro_meug_1334, retro_meug_135, retro_meug_1421, retro_meug_1451, retro_meug_1465, retro_meug_1501, retro_meug_1662, retro_meug_1690, retro_meug_1710, retro_meug_1829, retro_meug_2023, retro_meug_2044, retro_meug_2050, retro_meug_316, retro_meug_601, retro_meug_755, retro_meug_792, retro_meug_850, retro_meug_920,
Myotis lucifugus ENSMLUG00000016760 ortholog_one2one 1 retrogene
retro_mluc_1250,
Mustela putorius furo ENSMPUG00000008289 ortholog_one2one 3 retrogenes
retro_mputfur_1030, retro_mputfur_609, retro_mputfur_761,
Nomascus leucogenys ENSNLEG00000010060 ortholog_one2one 2 retrogenes
retro_nleu_11, retro_nleu_1489,
Ornithorhynchus anatinus ENSOANG00000004908 ortholog_one2one 1 retrogene
retro_oana_73,
Otolemur garnettii ENSOGAG00000004630 ortholog_one2one 8 retrogenes
retro_ogar_1067, retro_ogar_2034, retro_ogar_2329, retro_ogar_2497, retro_ogar_2583, retro_ogar_3191, retro_ogar_3270, retro_ogar_643,
Ictidomys tridecemlineatus ENSSTOG00000007687 within_species_paralog 4 retrogenes
retro_itri_1509, retro_itri_1740, retro_itri_1816, retro_itri_195,
Tursiops truncatus ENSTTRG00000001835 ortholog_one2one 1 retrogene
retro_ttru_993,
Drosophila melanogaster FBgn0000557 ortholog_many2many 1 retrogene
retro_dmel_9,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_1028 81.99 97.67
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSTOG00000028862 retrocopies