RetrogeneDB ID: | retro_mputfur_761 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896945.1:11150711..11151406(+) | ||
Located in intron of: | ENSMPUG00000014073 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EEF1A2 | ||
Ensembl ID: | ENSMPUG00000008289 | ||
Aliases: | None | ||
Description: | eukaryotic translation elongation factor 1 alpha 2 [Source:HGNC Symbol;Acc:3192] |
Percent Identity: | 71.55 % |
Parental protein coverage: | 55.92 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | TVPFVPISGWHGDNMLEPSPNMPWFKGWKVERKEGNASGVSLLEALDTILPPTRPTDKP-LRLPLQDVYK |
TV.FVPISGW..DNML.PS.NMPWFKG.KV..K.GNAS...LLEALD.ILPPT.PTDKP.L.L.L.DVYK | |
Retrocopy | TVAFVPISGWNCDNMLKPSANMPWFKGLKVTCKDGNASRTTLLEALDYILPPTCPTDKP>LCLFLEDVYK |
Parental | IGGIGTVPVGRVETGVLRPGMVVTFAPVNITTEVKSVEMHHEALSEALPG-DNVGFNVKNVSVKDIRRGN |
I.GIG.VPVG.VETGVL.PGM.VTFAPVN.TT..K.VEMHH....EAL.G.DNV..NV.NVSV.....GN | |
Retrocopy | ISGIGAVPVGGVETGVLKPGMMVTFAPVNVTTKLKFVEMHH----EALSG<DNVDINVMNVSVNNVYCGN |
Parental | VCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKAL |
V.GDSK.DPP.EAA.F...VIILNHPG.I.AGY.PV.DCHT.HIACKFAELKE..D..SGKKLED.PK.. | |
Retrocopy | VVGDSKNDPPMEAAGFMARVIILNHPG*IIAGYAPVLDCHTTHIACKFAELKERVDHHSGKKLEDGPKFF |
Parental | KSGDAAIVEM-VPGKPMCVESFSQYPPLD |
KS.D..I..M.V.GKPMCVESFS.YPPLD | |
Retrocopy | KSSDLVIIDM<VLGKPMCVESFSDYPPLD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |