Parental gene:

CDC42, ENSTBEG00000002614

Aliases:None
Description:cell division cycle 42 [Source:HGNC Symbol;Acc:1736]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_2873:193107..204711(+)


>ENSTBEG00000002614
GTTTTTGACAACTATGCAGTCACAGTTATGATTGGTGGAGAGCCATATACTCTTGGGCTTTTTGATACTGCAGGGCAAGA
GGATTATGACAGATTACGACCGCTGAGTTATCCACAAACAGATGTATTTCTAGTTTGCTTTTCAGTGGTCTCTCCGTCCT
CATTTGAAAATGTGAAAGAAAAGTGGGTGCCTGAGATTACTCATCACTGTCCAAAGACTCCTTTCTTGCTTGTTGGGACT
CAAATTGATCTCAGAGATGACCCCTCTACTATTGAGAAACTTGCCAAGAACAAACAGAAGCCTATCACTCCAGAGACAGC
TGAAAAGCTGGCCCGTGACCTGAAGGCTGTCAAGTATGTGGAGTGTTCTGCACTCACACAGAAAGGCCTAAAGAATGTAT
TTGATGAAGCAATACTGGCTGCCCTGGAGCCTCCAGAACCCAAGAAGAGTCGCAGGTGTGTGCTGCTATGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000014707 possible_ortholog 5 retrogenes
retro_cfam_1587, retro_cfam_1970, retro_cfam_2189, retro_cfam_88, retro_cfam_89,
Choloepus hoffmanni ENSCHOG00000005306 possible_ortholog 10 retrogenes
retro_chof_103, retro_chof_1044, retro_chof_1195, retro_chof_1853, retro_chof_2055, retro_chof_2105, retro_chof_2331, retro_chof_2407, retro_chof_50, retro_chof_800,
Callithrix jacchus ENSCJAG00000005912 ortholog_one2one 6 retrogenes
retro_cjac_1275, retro_cjac_1808, retro_cjac_1826, retro_cjac_2251, retro_cjac_751, retro_cjac_911,
Cavia porcellus ENSCPOG00000006543 possible_ortholog 4 retrogenes
retro_cpor_1168, retro_cpor_286, retro_cpor_33, retro_cpor_887,
Equus caballus ENSECAG00000019180 possible_ortholog 1 retrogene
retro_ecab_11,
Echinops telfairi ENSETEG00000004443 possible_ortholog 1 retrogene
retro_etel_2010,
Felis catus ENSFCAG00000004853 ortholog_one2many 4 retrogenes
retro_fcat_129, retro_fcat_1421, retro_fcat_1579, retro_fcat_896,
Monodelphis domestica ENSMODG00000016078 ortholog_one2one 3 retrogenes
retro_mdom_18, retro_mdom_181, retro_mdom_537,
Mustela putorius furo ENSMPUG00000015999 possible_ortholog 2 retrogenes
retro_mputfur_308, retro_mputfur_957,
Oryctolagus cuniculus ENSOCUG00000009986 possible_ortholog 1 retrogene
retro_ocun_60,
Otolemur garnettii ENSOGAG00000014261 possible_ortholog 1 retrogene
retro_ogar_131,
Sorex araneus ENSSARG00000005184 possible_ortholog 3 retrogenes
retro_sara_10, retro_sara_220, retro_sara_3,
Tupaia belangeri ENSTBEG00000007272 other_paralog 4 retrogenes
retro_tbel_1796, retro_tbel_2564, retro_tbel_4296, retro_tbel_9,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_183 89.12 93.59
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2. retro_tbel_584 86.30 92.31
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3. retro_tbel_585 81.65 100.00
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4. retro_tbel_860 89.68 99.36
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5. retro_tbel_873 63.16 84.62
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6. retro_tbel_1091 84.81 100.00
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7. retro_tbel_1379 73.28 73.72
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8. retro_tbel_1697 87.22 84.62
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9. retro_tbel_1711 91.43 89.10
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10. retro_tbel_2320 96.77 99.36
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11. retro_tbel_2447 55.97 100.00
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12. retro_tbel_2721 90.45 100.00
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13. retro_tbel_4016 89.31 100.00
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14. retro_tbel_4168 85.91 94.87
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15. retro_tbel_4184 87.97 84.62
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16. retro_tbel_4273 84.08 100.00
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17. retro_tbel_4427 77.10 82.69
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Download FASTA sequences of all ENSTBEG00000002614 retrocopies